KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os07t0625500-01
Entry
Os07t0625500-01   CDS       T02163                                 
Symbol
Os07g0625500
Name
(RAP-DB) Similar to Fimbriata-associated protein (Fragment).
  KO
K03094  S-phase kinase-associated protein 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03083  Polycomb repressive complex
dosa04120  Ubiquitin mediated proteolysis
dosa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Os07t0625500-01 (Os07g0625500)
   04120 Ubiquitin mediated proteolysis
    Os07t0625500-01 (Os07g0625500)
  09126 Chromosome
   03083 Polycomb repressive complex
    Os07t0625500-01 (Os07g0625500)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os07t0625500-01 (Os07g0625500)
   04121 Ubiquitin system [BR:dosa04121]
    Os07t0625500-01 (Os07g0625500)
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os07t0625500-01 (Os07g0625500)
Membrane trafficking [BR:dosa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    Os07t0625500-01 (Os07g0625500)
Ubiquitin system [BR:dosa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     Os07t0625500-01 (Os07g0625500)
   Cul7 complex
     Os07t0625500-01 (Os07g0625500)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     Os07t0625500-01 (Os07g0625500)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     Os07t0625500-01 (Os07g0625500)
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
RAP-DB: Os07t0625500-01
Position
chr07:25907751..25908275
AA seq 174 aa
MATGSGAAAAAAADAEEKESGSRMITLTSNEGKAFVVTEASARQSATIRSMVDDGGCVDK
GFPLPNVDSKTLARVIQYCDEHGNKEPHTVDERAALAKFDRDFIAELDADKAFLYDVTMA
ANYLHIQGLLALTTQCVADTIKGKTPEEIRTAFGIEYDLTAQDEKEIKEEDTHA
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcgacggggagcggagcagcggcggcggcggcggcggatgcggaggagaaggagagc
ggcagcaggatgatcaccctgacgagcaacgagggcaaggcattcgttgtgacggaggcg
tcggcgaggcagtccgcgaccatcaggagcatggtcgacgacggcggctgcgtcgacaag
ggcttcccgctccccaacgtcgactccaagaccctcgcgagggtgatccagtactgcgac
gagcacggcaacaaggagccccacaccgtcgacgagagagcggcgctcgccaagttcgac
agggacttcatcgccgagctggacgccgacaaggccttcctctacgacgtcaccatggcc
gccaactacctccacatccaagggctcctcgccctcaccacccagtgcgtcgccgacacc
atcaagggcaagacccccgaggagatccgcacggccttcggcatcgagtacgacctcacc
gcgcaggacgagaaggagatcaaggaggaggatactcacgcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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