KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08t0245400-01
Entry
Os08t0245400-01   CDS       T02163                                 
Symbol
Os08g0245400
Name
(RAP-DB) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 domain containing protein.
  KO
K19562  bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:6.3.3.3 2.6.1.62]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00780  Biotin metabolism
dosa01100  Metabolic pathways
dosa01240  Biosynthesis of cofactors
Module
dosa_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    Os08t0245400-01 (Os08g0245400)
Enzymes [BR:dosa01000]
 2. Transferases
  2.6  Transferring nitrogenous groups
   2.6.1  Transaminases
    2.6.1.62  adenosylmethionine---8-amino-7-oxononanoate transaminase
     Os08t0245400-01 (Os08g0245400)
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.3  Cyclo-ligases
    6.3.3.3  dethiobiotin synthase
     Os08t0245400-01 (Os08g0245400)
SSDB
Motif
Pfam: Aminotran_3 AAA_26
Other DBs
RAP-DB: Os08t0245400-01
Position
chr08:complement(join(8887413..8888053,8886539..8886709,8886073..8886334,8885899..8885976,8885626..8885746,8885326..8885474,8883497..8883591,8883164..8883279,8882941..8883087,8882479..8882612,8882004..8882135,8881731..8881865,8881017..8881129,8880248..8880419))
AA seq 821 aa
MLRLLRHARRHSTSSSSSAAAAAVPLTSPAFAVFGANTGVGKTLVSAGLVASLLASPSPS
PSTVAYLKPLQTGFPDDSDARFVFDRAPALLRRLRLAGGGASTRLVASNHTLFPSPAVDP
LPERQDTVVNYGGEEGVEEKALVCRTVYAWREPVSPHLAAEREGMPVEDEEVRWLVDRWL
AEEDGGGEVWKVLETAGGVASPGPSGTLQCDLYRSSRLPAVLVGDGRLGGISSTLSAYET
LLLRGYDVGSVILEDRGLSNDRFLLSYLRKRVPVHVLPPIPEDPKDDLTDWFSESSSAFS
SLKDSLQSFHSRRVQRLNSMQRKSKYLLWWPFTQHDLVPVDSVTVIDSRFGENFSAYKVK
DKTIVPQFDACASWWTQGPDSNLQIELARDMGYAAARYGHVMFPENVHEPALRCAELLLG
GVGKDWASRVYFSDNGSTAIEIALKMAFRKYACDHGIIVDSEKDIRSEGSVHFKVLALNG
SYHGDTLGAMEAQAPSAYTSFLQQPWYSGRGLFLDPPTVYIKNKSANLSLPPSIMHDQLS
SCDTCFSSLTEVFCKTRDTSSAANVYVSYISQQLSQYAMSNNSEHIAALIIEPVIQGAGG
MHLIDPLFQRLLVKECKNRKIPVIFDEVFTGFWRLGVESASELLGCFPDISCYAKLMTGG
IVPLAATLATEPIFEAFRSDSKLTALLHGHSYTAHPMGCTAAVKAIQWYKDPSTNSNIDL
DRMKLKELWDSALVNHLSSLPNVKRVVSLGTLCAIELKAEGSDAGYASLYASSLIRQLRE
EDNIYARPLGNVIYLMCGPCTTQDSCTRQLAKVHRRLQKLN
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgctccgcctcctccgccacgctcgccgccactccacctcctcctcctcctccgccgcc
gccgccgccgtgcccctcacctcgccggccttcgccgtcttcggcgccaacacgggcgtc
ggcaagacgctcgtctccgcgggcctcgtcgcctcccttctcgcctccccctccccttcc
ccttccaccgtcgcctacctcaagccgctccagaccggcttccccgatgactccgacgcg
cgcttcgtcttcgaccgggcccccgcgctcctccgccgcctccgcctcgccggcggcggc
gcctccacccgcctcgtcgcgtccaaccacaccctcttcccttcccccgccgtggatccc
ctccccgagcgccaggacacggtggtgaactacggcggtgaggagggggtggaggagaag
gcgctcgtgtgcaggacggtgtacgcgtggcgggagcccgtgtcgccgcacctggcggcg
gagagggaggggatgccggtggaggacgaggaggtcaggtggctcgtggaccggtggctg
gcggaggaggacgggggtggggaggtgtggaaggtgctcgagacggccggcggcgtcgcc
agccctggcccttctggcacgctccaatgtgatctctatcggtcctctaggttacctgca
gttcttgttggagatggtcgtctaggtggtatttcatctactttatctgcctacgaaact
ctgttgctcagaggatatgatgtgggctcagttattttggaagatcgtggcttgtcgaat
gacagattcctgctctcatacttgagaaagagggtacctgtgcatgtcctgccaccaatt
cctgaggatcccaaagacgacctaactgattggttttctgagtcatcctcagcttttagt
tcacttaaagatagtctgcaatcttttcattcacgaagagttcaaaggctaaacagtatg
cagagaaaatcaaagtatttgttgtggtggcctttcactcagcatgatcttgtacctgta
gattctgttacagttattgattcgcgttttggtgagaatttctcagcatacaaggttaaa
gacaaaacgattgttccccagtttgatgcatgtgctagttggtggacacaaggacctgat
tctaacttacagattgaacttgcaagagatatgggttatgctgctgcaaggtatggtcat
gtgatgtttccagagaatgttcatgaacctgctcttcgttgtgcagaacttttgcttggt
ggtgttggtaaagattgggcttctcgagtttatttttcagacaatggatctactgcaatt
gaaattgctttgaagatggcatttcgtaaatatgcatgtgaccatgggattatagtggac
agcgaaaaagatatcagaagtgaaggaagtgttcattttaaggtccttgctttaaatggt
tcctaccacggggatactttgggtgctatggaagcacaagctccatcagcttacacatct
tttcttcagcagccatggtactcggggcgaggactttttctagatcctcctacagtgtac
attaaaaacaaaagcgccaacctttctcttcccccatcgataatgcatgatcaactgagt
tcttgtgatacatgtttttcctcattaactgaagttttttgcaagaccagggacacatcg
tctgctgctaatgtatatgtttcatacatatcacaacaactatcacagtatgctatgtca
aataattcagagcatattgcagcattaattatagagccagtaatacaaggtgcaggggga
atgcatttgatagatccccttttccagagattacttgtcaaagagtgtaaaaatcgaaaa
attcctgtcatatttgatgaggtatttacaggattttggcgtctcggtgtggagtctgct
tcagagttgcttggctgttttcctgatatctcttgttatgctaaattgatgactggtggc
attgtaccattggctgcaactttagctacagagcctatttttgaagccttcagaagtgac
tctaagctaacagcactcttgcatggccattcctataccgcgcatcccatgggctgtacc
gcagcagtaaaagctatccaatggtataaagatccctccaccaattcaaatattgatctt
gatcgtatgaagctgaaggagctatgggatagtgcactagtgaaccatttatcgtccctg
ccaaatgtgaaaagagtggtgtccttaggaactctgtgtgcaatcgagctaaaggctgag
ggatcagatgctgggtacgcatcactttatgcgagttccttaatccgacaacttcgtgag
gaggataacatctacgctcggcccctgggtaatgtgatataccttatgtgtggtccatgc
acaactcaagatagctgcactcgccagctcgccaaagtgcatcgtagacttcaaaagttg
aattga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (6)   
   KEGG ENZYME (2)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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