KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os11t0544800-01
Entry
Os11t0544800-01   CDS       T02163                                 
Symbol
Os11g0544800
Name
(RAP-DB) Similar to GATB (GLU-ADT SUBUNIT B); carbon-nitrogen ligase, with glutamine as amido-N-donor / glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ ligase.
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970  Aminoacyl-tRNA biosynthesis
dosa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Os11t0544800-01 (Os11g0544800)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:dosa03029]
    Os11t0544800-01 (Os11g0544800)
Enzymes [BR:dosa01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Os11t0544800-01 (Os11g0544800)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Os11t0544800-01 (Os11g0544800)
Mitochondrial biogenesis [BR:dosa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Os11t0544800-01 (Os11g0544800)
SSDB
Motif
Pfam: GatB_N GatB_Yqey
Other DBs
RAP-DB: Os11t0544800-01
Position
chr11:complement(join(20034418..20034419,20033509..20034148,20032595..20032804,20031867..20032007,20031567..20031770,20031101..20031298,20030814..20030882,20030311..20030427,20030145..20030225))
AA seq 553 aa
RSLPALGRTMALTLLRGMRTPVVARRNAGLFFTTLQSPLLSRFTMRAESARAAAPKSIQL
ATKEAAEQKAQGFEAVIGIETHVQLSTVTKAFCSCPYSYGSQPNSTVCPTCMGHPGTLPV
LNAKVVECAVRLGLALNCEIAMTSKFDRKQYFYPDLPKGYQISQFDIPIAKEGYLDLDLP
VEFGGGHRRFGVTRVHMEEDAGKLLHSESGSYSQVDLNRAGVPLLEIVSEPDMRTGIEAA
EYGAELQRLVRYLGVSNGNMQEGSLRCDVNVSVRPIGQSNFGTKVEIKNMNSFSAISRAI
DYEISRQILLHKEGQADQIVQETRLWDESSQKTFTMRKKEGLADYRYFPEPDLPEVVLTS
EYIDEIQNSMPELPEAKRRRFENMGLSMQDVLFLANDDNVARFFDSTLEHGADAKLAANW
IMGDIAAYLKNEKLSIDEIKLTPLELSELIASIRNGTISGKIGKEILIELIAKGGTVKSV
IEEKDLVQIADPAAIEAMVDQVLADNPKQLEQYRSGKTKLQGFFAGQVMKASKGKANPVL
LNKILGEKLKANS
NT seq 1662 nt   +upstreamnt  +downstreamnt
aggtccctccctgcattagggcgcacaatggcactgacccttctcagagggatgcgaacg
ccggttgtagctagaaggaatgctggcttgttcttcaccacattgcagtctccgttgttg
tcccgcttcacgatgagagcggagagcgcgcgggccgcagcgcccaagtcgattcagctg
gcgaccaaggaggcggcggagcagaaggcgcagggcttcgaggcggtcatcgggatcgag
acccatgtccagctctcgacggtcacaaaggcgttctgctcgtgcccgtacagctacggg
tcgcagccgaacagcaccgtctgccccacctgcatggggcaccccggaacgctgcccgtt
cttaacgcaaaggttgtcgaatgcgccgtgaggttgggcctcgctctcaattgcgagatc
gcgatgacgtccaagtttgatcggaagcagtacttctacccggacctgcccaaggggtat
cagatttcgcagtttgacattcccattgccaaggagggttaccttgatttggatcttccg
gtggagttcggcggtgggcataggagatttggggtcacaagggtgcatatggaagaagat
gctggcaagctgcttcactctgaatccgggagttactctcaggttgacttaaatagggct
ggcgttcctttacttgaaattgtctcagagccagatatgagaacagggatagaggctgcc
gagtatggtgctgagctacagaggcttgttaggtacctgggcgtgagtaatggtaacatg
caggaaggttcccttcgctgtgatgtgaatgtttctgttcggccaattggacaatcaaat
tttggtacaaaggttgaaataaagaatatgaattcattttctgcaataagtagggcaata
gattatgagatctcccggcagattcttcttcataaagaaggtcaggctgatcaaattgta
caagaaacccggctgtgggatgaatcttctcagaaaacttttacaatgcgaaaaaaggag
ggacttgctgattatagatattttcctgagcctgatcttcctgaagttgttcttactagt
gagtacattgatgaaattcaaaactcaatgccagagcttcctgaagcaaagcgtaggcgc
ttcgagaatatgggactcagcatgcaagatgttcttttccttgctaatgacgataatgtt
gctcggttcttcgattctacccttgagcacggcgcggatgcaaagctggctgccaactgg
atcatgggtgacattgctgcttatttgaaaaatgaaaaactttccattgatgaaattaaa
ttaacacctctggagctttctgaattgattgcatctataaggaatggaactatcagtggg
aagattggaaaggagattctgattgaactcattgcgaaaggtggaactgtcaagtctgtg
atagaggagaaagatttggttcagatagcagatcctgcagcaattgaggcaatggtagat
caagtattagctgataatccaaagcaacttgagcagtatcggtccgggaaaactaaattg
caaggattttttgctggccaggtgatgaaagcatcaaagggtaaagctaatcctgttttg
ttgaacaaaatcctcggggagaaattgaaggccaatagttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   OC (1)   
   RAP-DB (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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