KEGG   Dendroctonus ponderosae (mountain pine beetle): 109539278
Entry
109539278         CDS       T04899                                 
Name
(RefSeq) E3 ubiquitin-protein ligase Iruka isoform X1
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dpa04131]
    109539278
   04121 Ubiquitin system [BR:dpa04121]
    109539278
Enzymes [BR:dpa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109539278
Membrane trafficking [BR:dpa04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    109539278
Ubiquitin system [BR:dpa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109539278
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zinc_ribbon_9 zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf-rbx1 zf-RING_UBOX HypA zf-ANAPC11 zf-RING_16 Prok-RING_1 zf-C2H2_2 zinc-ribbons_6 Rad50_zn_hook
Other DBs
NCBI-GeneID: 109539278
NCBI-ProteinID: XP_019762488
EnsemblRapid: LOC109539278
UniProt: N6TDC9
Position
Unknown
AA seq 302 aa
MAEAAVEEPITHARFYCHVCHVEFQNRPNSFTCPHCADGFVEELGDNSTPLQFDESWERI
SDTSEPEYLHSALLGRRASENGGPMEGRYSGLPRTLTRLASSNLRQQHPIEHLVHDFIIN
LGVGVNLGGPGNVQLFLGNPGDYAWGREGLDAIVTQLLNQMDSTGPPPVSKAVIDALQVV
DVTGEQVAQHLQCSVCWEHFTVKEQVRQLPCLHIYHEGCIRPWLELHGTCPICRQNLTDG
EDSNPISSDQTGVEAATGQATNVQNVLRSLFGATPSGSQSNQMDQSESSSNSPTSYDGGN
VF
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcggaggcagccgtagaagagccgataacacatgcgagattttactgtcatgtatgc
cacgtggaattccaaaacagacctaattcttttacatgtccccattgcgctgatgggttc
gtcgaagaactaggagacaactcaacacctttacaattcgacgaatcttgggaacgaatt
tcagacacgagtgagccggaatatttgcatagtgcactactgggtcggcgagcatcagag
aacggaggaccgatggaaggaaggtatagcggacttccaagaacgctgactcgtctggca
tcttcaaatctgagacagcaacatcccatcgagcacttagtacacgactttatcattaat
ttgggggtaggtgtgaatttaggtggaccgggaaatgtacaactttttctgggaaacccc
ggggattatgcttggggtagagaaggcctagatgccatagtaacacagcttttgaatcaa
atggacagtacaggtcctccgccagtgtctaaagctgtaatagatgctttgcaagtcgta
gacgtaacaggtgaacaagtcgctcagcatctacaatgttccgtctgctgggagcatttt
accgtgaaggagcaagtgcgacaactgccctgcctacacatataccacgaaggctgcata
agaccctggcttgagctgcatggtacttgccctatttgcagacaaaatctcaccgatggg
gaagatagcaacccgatcagcagcgaccaaacgggcgtagaagctgcgactgggcaagcc
acaaatgttcaaaatgtgctccgttctctttttggcgcaacaccgtctggaagtcaaagt
aatcagatggaccaatccgaatccagcagtaatagtccaacgtcatacgacggcggtaac
gtcttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (16)   
   Pfam (16)   
All databases (52)   

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