KEGG   Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_81794
Entry
DICPUDRAFT_81794  CDS       T02090                                 
Name
(RefSeq) RNA polymerase II core subunit
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
dpp  Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03020  RNA polymerase
dpp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DICPUDRAFT_81794
  09124 Replication and repair
   03420 Nucleotide excision repair
    DICPUDRAFT_81794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpp03021]
    DICPUDRAFT_81794
   03400 DNA repair and recombination proteins [BR:dpp03400]
    DICPUDRAFT_81794
Transcription machinery [BR:dpp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     DICPUDRAFT_81794
DNA repair and recombination proteins [BR:dpp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DICPUDRAFT_81794
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C
Other DBs
NCBI-GeneID: 10507280
NCBI-ProteinID: XP_003291110
JGI: Dicpu1_81794
UniProt: F0ZUL3
Position
Unknown
AA seq 109 aa
MNFCSECNNMLYPKADRANRTLLLACRICDHKEEATNNCVYRNEIKHSVMEKTHISQDIA
ADPTLPRTRAAKCPQCGGREAAFFQSMTVENGMTLFYVCCACSEKWVHK
NT seq 330 nt   +upstreamnt  +downstreamnt
atgaatttttgtagcgaatgtaataatatgttatatcctaaagctgatagagctaacaga
acattacttttagcttgtagaatttgcgatcataaagaagaggctacaaataattgtgta
tacagaaatgaaattaaacattcagtaatggaaaaaacacatatttcacaagatattgct
gcagatccaacattacctcgtaccagagccgccaaatgtcctcaatgtggtggtagagag
gcagctttcttccaatctatgactgtcgaaaatggtatgactctattttatgtatgttgt
gcttgttccgaaaaatgggttcataaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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