KEGG T01426: Deipr

Deinococcus proteolyticus: Deipr_1243

Entry

Deipr_1243        CDS       T01426

Name

(GenBank) DNA topoisomerase (ATP-hydrolyzing)

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

dpt Deinococcus proteolyticus

Brite

KEGG Orthology (KO) [BR:dpt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpt03032]
    Deipr_1243
   03400 DNA repair and recombination proteins [BR:dpt03400]
    Deipr_1243
Enzymes [BR:dpt01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Deipr_1243
DNA replication proteins [BR:dpt03032]
Prokaryotic type
  DNA Topoisomerases
   Deipr_1243
DNA repair and recombination proteins [BR:dpt03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Deipr_1243

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3

Other DBs

NCBI-ProteinID:

ADY26393

UniProt:

F0RNY4

Position

1319701..1321668

AA seq 655 aa
MTNPNSNYTADSISILKGLEAVRKRPGMYVQGGTGIDGYHQLLTEIIDNAIDEGLAGFAN
EITVTMHEDGSATVTDNGRGIPVDIMKSEGRSAIEVIFTELHAGGKFGQGAYKVSGGLHG
VGSSVVNALSTYLDVTVNKGGQLHHIRFEKGVVTTPLEVLGKTPKDVTWSTKVSFHPDPA
VFSEFENLFDYDRIRRRLRELAYLTGLKIVLRDERAVLHAGEVREETFHEQGGIANFAAS
LVSDSTKLLYDQPIVMRGTSNDVEVEVAFIHANTYSSDNILTYANMIRTRDGGTPLTGFK
TAYTRILNKYAKDKNLVKSGNPAPSGDDLLEGIYCVISVKLGDPQFESQAKVKLLNSEAQ
TAVNAIVGEKFAEFLEENPKVGKTIVEKAAEAARAREAARKARDIVRRSNPLENDDLPGK
LADCSSQDPSESELFIVEGNSAGGSAKSGRERRFQAILPLRGKILNVEKAELNKSLKNAE
IRSMIAAIGAGVDGSGDQLRFDVEQLRYHKIIIMTDADMDGGHITTLLLTFFFRYMKPVV
EQGHLYIAQPPLYRITVGRQKTGEYLYNDDELRQHVARANKEGKKFEIQRFKGLGEMNAD
QLWETTMNPETRVLKQVAIEDLLVANEIFEDLMGSDVAPRKVFIQENARFAEITV

NT seq 1968 nt +upstreamnt +downstreamnt
atgaccaaccccaacagcaactacaccgccgattccatcagcattctcaaaggtctggaa
gcggtgcgtaagcgccccggcatgtacgtgcagggcggcaccggcattgacggttaccac
cagctgctgaccgaaatcatcgacaacgccatcgacgagggcctggccggcttcgccaac
gaaatcaccgtgaccatgcacgaggacggcagcgccaccgtgaccgacaacgggcgcggc
attcccgtagacatcatgaagtccgaaggccgctcggccatcgaggtcatctttaccgag
ctgcacgcgggcggtaagttcggccagggcgcttacaaggtctcaggcggtctgcacggt
gtgggttccagcgtggtgaacgcgctgagcacctacctggatgtgaccgtgaacaagggc
gggcagctgcaccacatccgcttcgagaagggcgtggtgaccaccccgctggaagtgctg
ggcaagacgcccaaggacgtgacctggagcaccaaggtcagcttccaccccgacccggct
gtgttcagcgagttcgagaacctgttcgactacgaccgcatccgccgccgcctgcgcgaa
ctggcctacctgacgggcctgaaaatcgtgctgcgcgacgagcgtgccgtgctgcacgcc
ggcgaagtgcgcgaggaaaccttccatgagcagggcggcatcgccaacttcgccgcctca
ctggtgagcgacagtaccaagctgctgtacgaccagcccatcgtgatgcgcggcaccagc
aacgacgtggaagtggaagtggcctttatccatgccaacacctattccagcgacaacatc
cttacctacgccaacatgatccgcacccgcgacggcggcaccccgctgaccggcttcaag
acggcctatacccgcatcctgaacaagtacgccaaggacaagaacctggtcaagagcggc
aacccggctcccagcggcgacgacctgctcgaaggcatctactgcgtcatcagcgtgaag
ctgggcgacccgcagttcgagtcgcaggccaaggtgaagctgctgaactccgaagcccag
accgccgtgaacgccatcgtgggcgagaagttcgcggagtttctggaagaaaatcccaaa
gtcggcaagaccatcgtggaaaaagctgccgaggccgcccgcgcccgcgaggccgcccgc
aaggcccgcgacatcgtgcgccgctccaatccccttgaaaacgacgatctgcccggcaag
ctggccgactgctccagccaggaccccagcgaatcggagctgtttatcgtggaagggaac
tcggccggtggcagtgccaagagtggccgtgagcgccgcttccaggcgattctgcccctg
cgcggcaagattctgaacgtggagaaagccgagctgaacaagagcctcaagaatgccgag
attcgcagcatgattgcggccatcggggccggggtggacggcagcggcgaccagctgcgc
ttcgacgtggagcagctgcgctaccacaaaatcatcatcatgaccgacgccgacatggac
ggcggccacatcaccacgctgctgctgacgttcttcttccgctacatgaagccggtggtg
gagcagggccacctgtacatcgcccagccgccgctgtaccgcatcacggtaggccgccag
aagaccggcgaatacctgtacaacgacgacgaactgcgccagcatgtggcccgcgccaac
aaggaaggcaagaagttcgaaattcagcgctttaagggcctgggcgagatgaacgccgac
cagctgtgggaaaccaccatgaatcccgaaacgcgggtgctcaagcaagtcgcgattgag
gacctgctggtcgccaacgagattttcgaggacctgatgggcagcgacgttgccccgcgc
aaggtcttcattcaggagaacgcccgcttcgcggaaatcacggtttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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