KEGG   Danio rerio (zebrafish): 100003956
Entry
100003956         CDS       T01004                                 
Symbol
cry1a
Name
(RefSeq) cryptochrome circadian regulator 1a
  KO
K02295  cryptochrome
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase
Other DBs
NCBI-GeneID: 100003956
NCBI-ProteinID: NP_001070765
ZFIN: ZDB-GENE-010426-2
Ensembl: ENSDARG00000045768
UniProt: A4QN37
Position
4:12013042..12026537
AA seq 619 aa
MVVNTVHWFRKGLRLHDNPSLRDSILGAHSVRCVYILDPWFAGSSNVGISRWRFLLQCLE
DLDASLRKLNSRLFVIRGQPTDVFPRLFKEWNINRLSYEYDSEPFGKERDAAIKKLANEA
GVEVIVRISHTLYDLDKIIELNGGQSPLTYKRFQTLISRMEAVETPAETITAEVMGPCTT
PLSDDHDEKFGVPSLEELGFDTEGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMN
ANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYRKVKKNSSPPLSLYGQLLWREFFYTAA
TNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHA
VACFLTRGDLWISWEEGMKVFEELLLDADWSVNAGSWMWLSCSSFFQQFFHCYCPVSFGR
RTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPESVQKAAKCIIGVHYPMPMVHHAEASRLN
IERMKQIYQQLSCYRGLGLLAMVPSNPNGNGENSTSLMGFKTGDMTKEVTTPSGYQMPPT
SQGEWHGRTMVYSQGDQQTSSIMTSQGFGNNGSTMCYRQDAQQITGRGLHSSIIQTSGKR
HSEESGPTTVSKVQRQCSS
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggtggtcaatacagtccactggttcaggaagggcttgcggctccacgacaatccttca
ctcagagactctattctgggagcgcacagtgtccgctgtgtgtacatcctcgacccctgg
ttcgcaggatcctccaacgtcgggatcagcaggtggaggtttttgctgcagtgtttggaa
gacttggacgccagcctccgcaaactcaattcacgactctttgttatccgtggccaaccc
accgatgtcttccccaggcttttcaaggaatggaacattaatcgtctgtcctacgagtat
gactcagagccatttggaaaggagagagatgctgctatcaagaagctagccaatgaggca
ggcgtggaggtgatagttcgcatctctcacacgctctacgatctggacaagatcatcgag
ctgaatggaggtcagtctccgctcacgtataagcgcttccagaccctcatcagcaggatg
gaggcggtggagacacccgcagagaccatcactgcagaagtcatggggccgtgcaccaca
ccgctttctgatgaccatgatgagaagtttggagttccctctttggaagagctcggcttc
gacacagagggcctttcctcagctgtgtggccaggaggagaaacagaggccctcactcgc
ctagagaggcacctggagaggaaggcttgggtggccaacttcgagagaccaagaatgaat
gccaattcgctgttggctagtcctacgggcctcagcccatatttaagattcggctgcctc
tcctgtcgactcttctacttcaaactcacagacctctacaggaaggtcaaaaagaacagc
tcacctcctctgtccctctatggccaattactgtggcgtgaattcttctacacggctgct
acaaacaacccacgctttgacaaaatggaagggaaccccatttgcgtgcagatcccatgg
gataaaaacccagaggctttggcaaagtgggctgaaggcaggacgggtttcccctggatc
gacgccatcatgacccagctgaggcaagagggctggatccaccatctggcccgacacgca
gtggcctgtttcctcacccgtggagacctgtggatcagctgggaggagggcatgaaggtg
ttcgaggagctgttgttggatgcagactggagtgtgaacgcaggaagctggatgtggctg
tcctgcagctccttcttccagcagttcttccactgctattgccctgtgagcttcggccgc
cgcactgaccccaacggagactacatacggcgatatctgccagtcttaaggggttttcct
gccaagtatatctatgacccctggaatgctccagaaagcgtccagaaagcagccaaatgt
ataattggtgtccactaccctatgcccatggtgcatcacgctgaggcaagccgccttaat
atagagcgtatgaaacagatctaccagcagctgtcttgctaccgaggcctgggactgctg
gcaatggtgccgtccaaccctaatggaaatggggagaattccacaagcttaatgggtttt
aaaactggagacatgactaaggaagtcactacaccttcagggtatcagatgccgcccacc
tctcaaggagaatggcatggcaggacaatggtttactcacaaggagaccaacaaacaagc
agcatcatgacttcacaaggttttggcaacaatggaagcacaatgtgctacaggcaagac
gcacagcagataacaggacgaggcttacacagcagcatcatccagacctctggaaaacga
cacagcgaggagtctggtcctaccactgtctcaaaagtccagaggcagtgcagctcctaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (11)   
   RefSeq(nuc) (1)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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