KEGG   Danio rerio (zebrafish): 100004402
Entry
100004402         CDS       T01004                                 
Symbol
plrg1
Name
(RefSeq) pleiotropic regulator 1
  KO
K12862  pleiotropic regulator 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100004402 (plrg1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    100004402 (plrg1)
   03400 DNA repair and recombination proteins [BR:dre03400]
    100004402 (plrg1)
Spliceosome [BR:dre03041]
 Complex B
  Other components
   Prp19 complex
    100004402 (plrg1)
 Complex C
   Prp19-CDC5 complex
    100004402 (plrg1)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100004402 (plrg1)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 Nucleoporin_N WDR54 Ricin_B_lectin
Other DBs
NCBI-GeneID: 100004402
NCBI-ProteinID: NP_998605
ZFIN: ZDB-GENE-040426-2787
Ensembl: ENSDARG00000037283
UniProt: Q6DRE2
Position
1:25650960..25666601
AA seq 511 aa
MTEDVQKHSVHTLVFRSLKRTHDMFVADHAKPIAQDEQSFKVKMAAKMRAEYKAVLHMPV
LKEGREKGSLHTSDPYGQSAYPLPDTTPEYLVTGTHPYPSAPGVVLTADTQMLKMPSEMG
VHSMALALPPSQARQEASRTAASVAEIHRHAGGAERSHPPQHALSLMEGGTRTLVPRKAP
TMPKPQWHPPWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLT
GHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVL
VTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTGSHDTTIRLWDLVAGK
TRATLTNHKKSVRALVLHPRQYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLAVNS
DGVLVSGADNGTIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSCVFDQSESRLITAEAD
KTIKVYKEDDTATEESHPVNWKPEILKRKRF
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgaccgaggacgtgcagaagcactcagtccacacgcttgtgtttcgctctttgaaacgg
actcatgatatgtttgtggcggatcatgccaaacctatagcgcaggacgagcagagcttc
aaggtgaagatggcagcaaagatgcgggccgaatacaaagctgtcttacacatgcctgtg
ctgaaggagggccgagaaaagggttctctccacacctctgacccatatggccaatcggcg
taccctctgcctgacactactccagaatatttggtgacaggaacacacccttatccatct
gctccaggagttgtcctcactgcagacacacaaatgctgaagatgcccagtgaaatgggt
gttcactccatggcccttgctcttcctccgtctcaagctaggcaggaagccagtcgaact
gcagccagtgtggcagaaatccacagacatgcaggaggagcagagagatctcatccccca
caacatgcactgtctcttatggaaggaggcacaaggacattggtaccaagaaaggctccc
accatgcccaaacctcaatggcatccaccttggaaactgtacagagtcatcagtggtcat
ctgggctgggtcagatctatagcagtggagcctggaaaccagtggtttgtgactggatca
gcagacagaactataaagatttgggatcttgccagtggtaagctaaagttgtctctaact
gggcacatcagcacagtgagaggggtggccgtcagcaaccgcagcccgtacctcttctct
tgtggcgaggacaaacaggttaaatgctgggacctcgagtataataaggttatacggcat
tatcatggtcatctgagtgcagtctatgaccttgacctccatccaaccattgatgtgctg
gttacttgtagtcgagatgccacagctagggtttgggacatcaggaccaaggcaaatgtc
cacactctttctggacacacaaacacagtggctacagtcaaatgtcaaagcgcagagccg
caggttgttacaggaagtcacgacaccaccattagactctgggatctggtcgctggcaag
acaagagcaacactgaccaatcacaagaagtctgtcagagcactggtgctccatcccaga
cagtacacctttgcctccggctctccagacaacattaagcagtggaaatttcctgatggg
aacttcatccaaaacctttcaggacacaacgcaattataaacacattggctgtcaattct
gatggtgttctggtgtcaggagctgataacggcactattcacatgtgggattggagaact
ggctataacttccagaggattcatgcagcggtgcagcctggttctctggacagcgagtct
ggcattttttcatgcgtgtttgatcagtctgagagtcgcctcattacagcagaggctgat
aaaactataaaggtctacaaagaggatgacacagcgactgaagaatcccatccagttaat
tggaagcctgagattctgaaaagaaagcgattttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (6)   
   Pfam (6)   
All databases (66)   

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