KEGG   Danio rerio (zebrafish): 100005536
Entry
100005536         CDS       T01004                                 
Name
(RefSeq) transportin-2
  KO
K18727  transportin-2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100005536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    100005536
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     100005536
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Arm IBN_N Vac14_Fab1_bd Cnd1 PDS5 Adaptin_N MMS19_C UNC45-central Dopey_N DUF2573 Caerin_1
Other DBs
NCBI-GeneID: 100005536
NCBI-ProteinID: XP_021333077
UniProt: A0A8M9PNK8
Position
1:54120335..54149855
AA seq 889 aa
MEWQPDEQGLQQVLQLLKDSQSPDTATQRAVQEKLEQLNQFPDFNNYLIFVLTSLKSEDE
PTRSLSGLILKNNVKAHYQNFPPAVADFIKRECLNNIGDPSPLIRATIGILITTIASKGE
LQTWPELLPQLCNLLNSEDYNTCEGSFGALQKICEDSSELLDSDALNRPLNIMIPKFLQF
FKHCSPKIRSHAIACVNQFIIGRAQALMDNIDTFIESLFALATDEDCEVRKNVCRALVML
LEVRIDRLIPHMHSIIQYMLQRTQDADENVALEACEFWLTLAEQPICKEALSGHLVQLIP
ILVNGMKYSEIDIILLKGDVEEDDTIPDSEQDIKPRFHKSRTVTLQHEGGEGEEGEDIDE
DEDDDDDTLSDWNLRKCSAAALDVLANVFRDELLPHLLPLLKGLLFHPDWVIKESGILVL
GAIAEGCMQGMVPYLPELIPHLIQCLCDKKALVRSIACWTLSRYAHWVVSQPPDAHLKPL
MTELLKRILDGNKRVQEAACSAFATLEEEACTELVPYLSYILDTLVFAFGKYQHKNLLIL
YDAIGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGF
LPYCEPVYQRCVTLVQKTLAQAMMYSQQPDQYEAPDKDFMIVALDLLSGLAEGLGGHVDQ
LVARSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFPHVKPCIAEFMPILGTNLNPEF
ISVCNNATWAIGEICMQMGVEMQPYVALVLPHLVEIINRPNTPKTLLENTAITIGRLGYV
CPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVAS
WVNPKDDLRDMFYKILHGFKDQVGEENWQQFSEQFPPILKERLSACYGV
NT seq 2670 nt   +upstreamnt  +downstreamnt
atggagtggcagccggatgaacagggtttacagcaggttctgcagttgttgaaggactcc
cagtctccagatacggccacgcagagagccgttcaagagaaactggagcagctgaatcag
tttcccgactttaacaactacctgatcttcgtactcaccagcctcaaatcagaagatgag
cccacccgttctctgagcggcctgatcctcaagaataatgtgaaggctcactaccagaac
ttccctccggctgtggctgacttcatcaagagagagtgtctcaacaacatcggcgacccg
tctcctcttatccgcgccaccatcggtattctcatcacaaccatcgcatctaaaggagag
ctgcagacatggcctgaactgcttcctcaactctgcaaccttctcaactcagaggattac
aacacctgcgagggctctttcggtgcactgcagaagatctgtgaggactcgtctgaactg
ctggacagtgacgctctgaatcgaccgctcaacatcatgatccctaaattcctgcagttc
ttcaaacactgcagccccaagatcaggtctcatgccatagcttgtgtgaatcagttcatt
attggcagagctcaggcgctcatggacaacatcgacacattcatagagtctctctttgca
ttggcgactgatgaagattgcgaggtgaggaagaacgtctgcagagctctggttatgctg
ctggaggtccggatcgaccgcctgataccacacatgcacagcatcatacagtacatgctg
cagcgcacacaggacgcggatgagaacgtggcgctggaggcctgtgagttctggctgact
ctagcagagcaacccatctgtaaagaggctctgtcaggacatctagttcaactcatcccc
atcctggtgaacgggatgaaatattccgagattgacatcatcttactaaagggtgatgtg
gaggaggacgacaccattcctgacagcgaacaggacatcaagccacgtttccataagtcc
cgcaccgtcacactgcagcacgagggaggagagggagaagaaggagaggacatcgatgaa
gacgaggatgatgatgacgacacactctctgactggaacctgcggaagtgttctgcggcg
gcgctggacgtgttggcgaacgtgtttcgggatgagctgttgccgcacctgttaccactg
ctgaagggtttgctgttccacccagactgggtcatcaaagaatctgggattctggtgctg
ggagccatcgctgaaggctgtatgcaggggatggtgccgtacctgcccgagctcatcccg
cacctcatccagtgtctgtgtgataagaaggctctggttcgctccatcgcctgctggacg
ctcagccgctatgcacactgggtagtaagccagccgccggacgcccacctcaaaccgctc
atgactgaactgctcaaacgcatcctggacggcaacaagagggtgcaggaggccgcttgc
agtgcgtttgcgactctggaggaggaggcgtgcacagagctggtcccgtatctcagctac
attttagacacgctggtgtttgcgttcgggaaatatcagcacaagaacctgctcatcctc
tacgatgccatcggcaccctggcggactctgtgggacatcatctcaaccagccggaatac
atccagaaactgatgccgcctctgatccagaagtggaatgaactgaaggatgaggataaa
gacctgtttcccctactggagtgtttgtcgtctgtggccacagcgttacagagtggtttc
ctcccatactgtgagcccgtctatcagcgctgtgtgactctggtgcagaaaacactcgca
caagccatgatgtacagccagcagccggatcagtacgaggctccagataaggacttcatg
atcgtggctctggatctgctcagtggtctggccgagggtctcgggggtcatgtggaccag
ctggttgctcgtagcaatatcatgacccttctgttccagtgtatgcaggacacgatgcct
gaagtgaggcagagctcgtttgcattgctgggggatttgaccaaggcctgttttccacat
gttaaaccttgcattgctgagttcatgccgattctggggacgaatctgaacccggaattc
atctcggtgtgtaataacgccacctgggccatcggagagatctgcatgcagatgggtgtg
gagatgcagccgtatgtggctctggttcttcctcatcttgtggagatcattaacagaccc
aacactcctaaaaccctgctggagaacacggccatcacgattggtcgcctgggttatgtg
tgtccacaagaagtggcgcccatgttgcaacagttcatcagaccctggtgcacatcgtta
cgaaacatccgagacaatgaagaaaaggactctgccttcagaggcatctgtgtgatgatc
ggtgtgaatcccggcggtgtggtccaggatttcatcttcttctgtgatgccgtggcctcc
tgggtcaatcctaaagatgacctgagggacatgttctacaagatcctccacggttttaag
gatcaggttggcgaggagaactggcagcagttctcggagcagtttccacccatcctgaag
gaacgcctctctgcatgctatggcgtgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (14)   
   Pfam (14)   
All databases (35)   

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