KEGG   Danio rerio (zebrafish): 100005675
Entry
100005675         CDS       T01004                                 
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b precursor
  KO
K05208  glutamate receptor ionotropic, NMDA 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04020  Calcium signaling pathway
dre04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    100005675 (grin1b)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100005675 (grin1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dre04040]
    100005675 (grin1b)
Ion channels [BR:dre04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   100005675 (grin1b)
SSDB
Motif
Pfam: Lig_chan ANF_receptor Lig_chan-Glu_bd SBP_bac_3 Ion_trans_2 Peripla_BP_6 SIP DUF6724 DivIC
Other DBs
NCBI-GeneID: 100005675
NCBI-ProteinID: NP_001137603
ZFIN: ZDB-GENE-051202-2
Ensembl: ENSDARG00000025728
UniProt: Q6ZM67
Position
5:complement(29597944..29643829)
AA seq 937 aa
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKVARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNAQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEHTVNGVKIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAFTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgcgcctggttctgttcgcctttctcatctcgtgctcctgcgcgagaggcggatgcgaa
cccaagactgtgaacattggagctgttctgagccagaagagatatgaacaagtgttcaaa
gacgccgtcacccaagccaacaatatctacggcaaagataagttcaagatgaacgcgatt
tcagtcacccataagccaaacgccatccagatggcactctccgtgtgcgaggatctcatc
tctaaccaggtttatgcgattttggtaagccaccctccccagtccaatgaccatctgaca
cccactccggtgtcctacacggctggcttttaccgtatccctgtagtgggcctgaccacc
cgcatgtccatctattctgataagagtatccacctctccttcctgcgcacggtgcctccc
tattcccaccaagcccaagtgtggtttgacatgatgcgcgagttccagtggaatcacatc
atcctgattgtgagcgacgaccacgagggcagagcggcacagaaaaggctggaaaccctt
ctggaggagagggaaacaaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtcctcctgttcagccaagacacaaat
ctgacggctctgctccaggaagccaaggagcttgaggcccgagttatcatcctgtctgca
agtgaagacgaagccgcggccatttataaagtggcacgccagctcaatatgacaggctct
ggttacgtgtggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggcctccagctaatcaatggcaagaacgagtctgcgcacatctacgat
gccgtggctgtggtggcccagtccatccaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtgcaa
gtgggcgtctacaatggctcgcaagttgtaatgaacgctcagaggaagattatttggcca
ggaggagagactgaaaagccgaaaggctatcagatgtcaactagattaaagattgtaaca
attcatcaagagccctttgtctacgtgaagccgactttacgagatggaacctgtaaggaa
gagcacactgtaaatggagtcaaaatcaaaaaagtgatctgcaccggcccaaacgagacc
attccaggtcgccccatagtgcctcagtgctgctatgggttctgcattgaccttttgatc
aaacttgcattcacaatgaacttcacctatgaagtgcatcttgtggctgatggcaaattt
ggcactcaggagcgtgtaaataacagcaacaagaaagagtggaatggcatgatgggagag
cttctgagtggcctggcagacatgatcgtggctccacttacaatcaacaatgaacgagcc
cagtacatagagttctctaaaccgttcaaataccaggggctcacaatacttgtcaaaaag
gaaataccacgcagtacactggactcgttcatgcagccctttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctaccttttagaccgtttcagc
ccatttggaaggtttaaagtgaatagtgaagaggaagaagaagacgccctcaccttatcc
tccgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcggcgaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagataagttcatctacgccacagtg
aagcagagctctgtggacatttatttccggcgccaagttgagcttagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgccgctgaagccatccaggctgtgcgagacaac
aaactccacgcatttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggttactacgggcgagctgttcttccgctctggattcggtatcggcatgcgtaaa
gacagcccttggaagcaaaacgtctctctggccatcctcagttcccatgagaacggcttc
atggaggacttggataaaacctgggttcgatatcaggagtgtgactccagaagcaatgcc
ccagccacgctcacttttgagaatatggcaggcgtgttcatgttggtggctggtggcata
gtcgccgggatcttcctcatcttcattgagattgcatacaaacgacacaaggacgcccgc
aggaagcaaatgcagctggcctttgcagcagttaacgtctggaggaagaacctacaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcgtccaaagacacgccatatcccacg
gacattacgggccagctcaacctgtcagacccctctgtgagcacagtggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (43)   

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