KEGG   Danio rerio (zebrafish): 100008368
Entry
100008368         CDS       T01004                                 
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100008368 (nthl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    100008368 (nthl1)
Enzymes [BR:dre01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     100008368 (nthl1)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     100008368 (nthl1)
 Prokaryotic type
     100008368 (nthl1)
SSDB
Motif
Pfam: HhH-GPD HHH RecR_HhH
Other DBs
NCBI-GeneID: 100008368
NCBI-ProteinID: XP_001346643
ZFIN: ZDB-GENE-120511-4
Ensembl: ENSDARG00000042881
UniProt: F1QBP9
Position
1:complement(54178602..54190821)
AA seq 430 aa
MYMFSRLTVRMNSPYFTSAALDSSATETMGKSTINKDGIRRLRSRMAQGLRSEDDPPKVK
AEVQEKSISDDPTHAHNPADCVKSTSYNTTSKMKEEPDQALLSPRKRGRGHLKVEYETEG
VGLKREPYDWRTQLSFIREMRSKRDAPVDQMGAEKCYDTQGLPEVRRYQVLISLMLSSQT
KDQVTAGAMQRLREHGLSVDGILKMDDETLGKLIYPVGFWRTKVKYIKQATALIQQEFGG
DIPNTVEGLIRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHRISNRLGWTKKETKTPEET
RRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSVCLNQHTCPSAHRSSPSKKIKSSP
AKPNNKLASPTALVKEEPEDTSAQRVSHQRRKNTGPQLNQQDLSASRQETPSLARNRRKG
RAGAPLSGQT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtatatgtttagtcgtttgactgtaagaatgaactctccatatttcacatcagctgcg
ttagactcttctgcaaccgagactatggggaaaagtactataaataaagacggaatccgc
agactgcgatcaagaatggctcaagggctcagatctgaagatgatcctccaaaagtgaaa
gcagaagttcaggagaagagtatttcagatgatccaacacacgcacacaatcctgcagat
tgtgtgaaatcaacatcctataacacaacctcaaaaatgaaagaagaaccagatcaagcc
ctcctgtcacctagaaaacgtgggcggggccatttgaaggtggagtatgaaacagaaggg
gtggggcttaagagggagccttatgattggcgaacgcagctgtcatttatcagggagatg
cggagcaaacgagatgctcctgtggaccaaatgggagcagagaaatgctacgacacacag
ggactacctgaggtgcgacgttaccaggtgctgatttctttaatgttgtcgagtcaaacg
aaagatcaggtgacggctggtgcgatgcagaggttacgtgagcatgggctgagtgtggac
ggcatcctgaagatggatgacgagaccttgggtaaactcatctacccagtgggcttctgg
aggacaaaggtgaagtacatcaaacaggccacagctctaatccagcaggagttcggtgga
gacatccctaatacagtagagggtctgatacgtctaccgggcgttggacctaagatggcc
cacctggccatggacattgcctggaatcaggtttcaggcattggtgttgacacccacgtg
catcgaatttcaaaccgcctcggatggaccaagaaggagaccaagacaccagaggagaca
cggagagctcttgaggagtggttgccacgagatctgtggagcgagatcaactggctgctg
gtgggcttcgggcagcaggtgtgtttacctgttggaccgttgtgctccgtgtgtttaaac
cagcacacctgtccctccgcacaccgatcatctcccagcaagaagatcaagtccagccct
gcaaaacccaacaacaagctagcatctccgacagcgctggttaaagaggaaccagaggac
acatctgcacaaagagtctcacatcagagaaggaaaaacaccggcccacagctcaaccaa
caggatctgtcagcatcaagacaagaaactccatctcttgccagaaacaggaggaagggg
agagcaggagcgccactatctggacagacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (49)   

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