KEGG   Danio rerio (zebrafish): 100330183
Entry
100330183         CDS       T01004                                 
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04142  Lysosome
dre04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100330183 (cltcl1)
   04142 Lysosome
    100330183 (cltcl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    100330183 (cltcl1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    100330183 (cltcl1)
Membrane trafficking [BR:dre04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    100330183 (cltcl1)
Exosome [BR:dre04147]
 Exosomal proteins
  Proteins found in most exosomes
   100330183 (cltcl1)
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link Coatomer_WDAD
Other DBs
NCBI-GeneID: 100330183
NCBI-ProteinID: XP_021334216
ZFIN: ZDB-GENE-130530-1029
Ensembl: ENSDARG00000091618
UniProt: A0A8M9QF30
Position
8:complement(2013909..2113144)
AA seq 1606 aa
MAQILPIRFQEHLQLQSLGVNPESISFSCLTMESDRFICIREKVGEQNQVIIIDMCDPSN
PIRRPITADSAIMNPASKVIALKDAARTLQIFNMEMKSKVKAHTMTEEVLFWKWISVNII
ALVTDTAVFHWSMEGESQPVKMFDRHASLAGCQIINYRTDQQHRWLLLIGISAQQNRVVG
AMQLFSVERKVSQPIEGHAAAFGLYKLEGNANTSTLFCFAVRGQAGGKLHIIEVGQPQAG
NQPFTKKAVDVFFPPEAQTDFPVAMQIGTKHGVIYLITKYGYFHMYDLESGVCIYMNRIS
AETIFVTAPHESTSGVIGVNKKGQVLSVCVEEENIVNYVTNVLQNADLALRMALRSDLPG
AEELLTHKFNTLFSQGSYTEAAKVAASAPKGVLRTAETLRRFQAVPAQGVQASPLLQYFG
VLLDRGQLNQLESVELCRPVLLQGRTPLLEKWLKAEKLECSEELGDLVKAADINLALSVY
LRANVPAKVIQCFAETAQFQKIILYSKKMGYSPDWVTLLRSVMRTGPDQGLQFAQMLVQN
EEPLVNISQVVDVFMEGNLVQQCTSFLLDALKNNRPEEGPLQTRLLEMNLIHAPQVADAI
LGNQMFSHYDRPHIAQLCEKAGLLQRALEHYSDPYDIKRAVVHTHLLNPEWLVNFFGSLS
VGDSIDCLKAMLSANLRQNLQLSVQIATKYHEQLGTQTLVELFESFKSYEGLFYFLGSIV
NFSQDPDVHFKYIQAACKTGQIKEVERICRESSCYNAEHVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEETIRNLILAVRGD
FSTDQLVEEVEKRNRLKLLLSWLETRVQEGCEEPATHNALAKIYIDSNNNPERFLRENQY
YDNVTVGRYCEKRDPHLAFVAYERGQCDLELIQVCNENSLFKSESRYLVRRKDPDLWARV
LEETNPYRRPLIDQVVQTALPETQDPEEVSVTVKAFMTADLPNELIELLEKIVLENSIFS
EHRNLQNLLILTAIKADRTRVMEFINQLDNYDAPDIANIAISNELYEEAFSIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCGDGCVWSQLAQAQLHRGLVKEAIDSYIKAGEPSAYME
VVDAANKSGNWEDLVKFLQMARKKAQESYVETELIFALAKTNRLTKLEDFINGPNNAHIQ
QVGERCYEDCMFEAARLLFNNVSNFARLASTLVHLGEFQAAVDSARKASCTRTWKEVCFA
CVDGEEFRLAQISGLHIVTHADELEELINYYLDRGYFEELIVLLEAALGLERAHMGMFTE
LAILYSKYKPQRMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAILTMM
NHPTDAWRDATFKELIGKVANVELYYKSLQFYLDYKPLLLNDLLSVLAPRLDHTRAVSFF
SRVNQLRLVKPYLRSVQSHNNRAVNEALNNLLTEEEDYQGLRSSIDVFDNFDSISLAQRL
ETHELLEFRRLAAHLYKSNQRWTHSIQICKKDKLYKDAMQFASESQDAAVALDLLRWFVS
EGKRECFAACLFSSYDLLPPDVVLELSWTHTLMDCANLLPQSECEK
NT seq 4821 nt   +upstreamnt  +downstreamnt
atggcgcagattttaccaatccgcttccaggagcatctgcagctgcagtctctgggagtg
aatccggagagcatcagcttcagctgcctcactatggagtctgaccgcttcatctgcatc
cgagaaaaagtgggcgagcaaaaccaggtaattataatcgatatgtgtgacccgagcaac
ccgatccgccggcccatcactgcagacagcgccatcatgaacccggccagcaaagttatc
gcgctcaaagatgcggcacgaacgctccagatcttcaacatggagatgaagagtaaagtg
aaggctcacaccatgacggaggaggtgctgttctggaagtggatctctgtgaacatcatc
gctctggtcactgatacagccgtctttcactggagtatggaaggagaatcacagcccgtt
aagatgtttgatcgacacgccagtttggccggatgccagatcatcaactacaggacagac
cagcagcaccgctggctcctgctcatcggcatctcagcacagcaaaatcgtgtggttggc
gcgatgcagttgttctcggtggagcgtaaggtttctcagccaatcgagggtcacgccgct
gcatttggactttataaactggaaggaaacgcaaacacttcaacactcttctgctttgct
gtcagaggacaagctggaggaaagctgcacatcattgaagtcggtcagccgcaggccgga
aaccagccgttcactaagaaagcagtggatgtgtttttccctccggaagcgcagacggac
ttccctgtggccatgcagatcggtactaagcatggcgtgatctacctcatcactaaatac
ggctactttcacatgtatgatctggagtctggagtgtgtatttacatgaaccgcatcagc
gctgagaccatattcgtcacagctcctcatgagagcacttccggggtcatcggggtcaac
aagaaggggcaggtgctgtcggtgtgtgtggaggaggagaacatagtgaattacgtgacg
aatgtcctccagaatgctgatctggcgctgcgcatggcgttacgcagtgatttacccgga
gcagaggagctgctgacgcacaagtttaacacactcttctctcagggcagctacactgag
gcagccaaagtggctgcgtcggctccaaagggtgttttgcggacagcagaaaccctccgc
aggttccaggcggtgccggctcagggtgtgcaggcgtctcctctgctgcagtatttcggg
gttctgctggaccgagggcagctcaatcagctggagtcagtggagctctgcaggccggtt
ctgctacagggacgcacacctctgctggagaagtggctcaaggctgagaagctggagtgt
tcagaagagttgggtgatctggtgaaggcggctgacatcaatctggccctcagtgtttac
ctgcgagccaacgttcctgctaaggtcatccagtgcttcgccgaaaccgctcagttccag
aagatcatcctctattcaaagaagatgggttattctccagactgggttactttattaagg
agtgtgatgaggaccggtcctgatcagggccttcagtttgctcagatgctggttcagaat
gaagagccgctggtgaacatcagccaggtggtggatgtgtttatggaggggaatctggtg
cagcagtgtacttccttcctattggatgctctaaaaaacaaccggccagaggaggggcct
ctgcagacacgcctcctggagatgaacctcattcacgcccctcaggtagccgatgcaatc
ctgggtaatcagatgttctcccactacgaccggcctcatatcgctcagctgtgtgagaaa
gctggcttactacagagggcactcgagcactacagcgacccctacgacatcaagcgagcc
gtcgtacacacacatctgctcaaccctgagtggctggtgaatttcttcggctctctgtct
gtgggcgactccattgattgtttaaaggccatgttgtccgcaaatctccggcagaacctg
cagctgagcgttcagatcgccaccaaataccatgagcagctgggcacacagacactggtg
gagctcttcgagtcctttaagagctacgagggtctgttttattttctgggctcgatcgtg
aacttcagtcaagacccggatgtgcatttcaagtacattcaggctgcgtgtaaaacgggt
cagattaaagaagtggagcgcatctgtcgagagagcagctgctataatgccgaacacgtc
aaaaacttcctcaaggaggccaaactcacggatcagcttcctctcatcatcgtgtgcgac
cgcttcgatttcgtccacgatctggtgttgtatttataccgcaacagcctgcagaaatac
atcgagatctacgtgcagaaggtgaaccccagtcgtctgccagtggtgattggaggcctg
ctggatgtggattgctctgaggaaaccatcaggaacctgattctggccgttcgaggagat
ttcagcaccgaccagctggtggaggaagtggagaagagaaaccgactgaagctgctgttg
tcctggctggagactcgtgttcaggagggctgtgaggagccggcaacccacaatgctctg
gcgaaaatctacatagacagtaacaacaacccagagcggttccttcgggaaaaccagtat
tatgacaacgtgactgtgggccgatactgcgagaagagagacccgcacctcgcgtttgtg
gcctacgagagaggacagtgtgacctggagctcatacaggtgtgcaacgagaactcattg
tttaaaagtgagtcgcggtatctggtgcggcggaaggatccggatctgtgggctcgtgtt
ctggaggagacgaacccctacagacgaccattgatcgaccaggtggttcagacagctctg
ccggagacgcaggatcccgaggaggtgtcggtgacggtgaaggccttcatgacggctgat
ctgcctaatgaactcatagagctgctggagaaaatcgtcctggagaattcaatattcagt
gaacacagaaacctgcagaacctgctgatcctaacagccattaaagcggaccgaacgcgg
gtgatggagtttatcaatcagctggataattatgatgctccggacatcgccaacatcgcc
atcagcaatgaactctatgaggaagctttctccatcttcaagaagtttgacgtcaacaca
tctgccatacaggttctgattgagcacattggtaatctggaccgggcgtatgagtttgcg
gagcgctgtggggacgggtgtgtgtggagtcagctggctcaggcgcagctccacagagga
ctggtgaaggaggccatcgactcctacattaaagctggagaaccgtctgcatacatggag
gtggtggacgctgccaataaaagtggtaactgggaggatctggtaaagtttcttcagatg
gcgagaaagaaagcccaagagtcgtatgtggagacggagctcatatttgctctggctaaa
acaaaccgtctgacaaaactggaggatttcatcaacggtccaaacaacgctcacatacag
caagttggtgagcggtgttatgaagactgtatgtttgaagccgctcgtctgctttttaat
aacgtgtctaatttcgctcgtctggcgtcaacgctcgttcatctgggagagtttcaggcg
gcagtcgacagcgcacgcaaggccagctgcacacgcacatggaaagaggtctgttttgca
tgtgtggatggagaggagttcagactggcgcagatctcaggcctccacatcgtcactcat
gcagatgaactggaggagctcattaactattacctggatcgtgggtatttcgaggagctg
attgtccttttagaagcggctctgggtttggagcgagcgcatatgggcatgttcactgaa
ctcgccatactgtactccaaatacaaaccccagaggatgagggaacatctggagctcttc
tggtcccgcgtcaacatcccgaaggtgttgcgggcagcagaacaggctcatctgtgggcg
gagcttgtgttcctgtatgataaatatgaggaatatgataatgccatcctgaccatgatg
aatcaccccacagacgcctggagagacgcaacttttaaagagctcatcggcaaggtggcg
aatgtggagctgtattataaatctctgcagttttatttggactataagccgctgcttctc
aatgatctgctctctgttctcgctcctcgactggatcacaccagagccgtcagcttcttc
agcagggtgaatcagttgcggctggttaaaccgtatctcagatcagtgcagagtcacaac
aacagagctgtgaatgaagcactcaacaacctgctgacggaggaggaggactatcagggt
ctgcgctcctccattgatgtgtttgataactttgactccatctctctggctcagcgtctg
gagactcatgagctgctggagttcagacgtctcgctgctcatctgtataagagtaaccag
cgctggactcacagcatccagatctgcaagaaagacaaactctacaaggatgcgatgcag
tttgcgtcagagtctcaggacgcggcggtggctctggatctgctgcgctggtttgtttca
gaagggaagcgcgagtgtttcgccgcgtgtctcttcagctcatatgacctgctgccgccg
gacgtggtgctggagctcagctggacacacacactgatggactgcgccaaccttctgcct
cagtctgaatgtgagaagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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