KEGG   Danio rerio (zebrafish): 100331874
Entry
100331874         CDS       T01004                                 
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b precursor
  KO
K06482  integrin alpha 3
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
dre04810  Regulation of actin cytoskeleton
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    100331874 (itga3b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100331874 (itga3b)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100331874 (itga3b)
   04810 Regulation of actin cytoskeleton
    100331874 (itga3b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    100331874 (itga3b)
   04515 Cell adhesion molecules [BR:dre04515]
    100331874 (itga3b)
   04090 CD molecules [BR:dre04090]
    100331874 (itga3b)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100331874 (itga3b)
Cell adhesion molecules [BR:dre04515]
 Integrins
  Integrin alpha subunits
   100331874 (itga3b)
CD molecules [BR:dre04090]
 Proteins
  100331874 (itga3b)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Collectrin LYRIC Fer4_22
Other DBs
NCBI-GeneID: 100331874
NCBI-ProteinID: NP_001177238
ZFIN: ZDB-GENE-050411-55
Ensembl: ENSDARG00000012824
UniProt: D7PS99
Position
12:complement(5584575..5663395)
AA seq 1041 aa
MAGKSLHLCVFVICAIQTNTGFNIDVQFPVIKEGKTKGSLFGFSVALHKQTEKAKKNLLL
VGAPQEKAQPQLSKFKINETGAVYYCPITVNLDDCGSMDLISPPKSTDMLEGMWLGVTVA
SQRNGGRVLACGHRYVKKLLGAEEQQRMVGKCYVRGNDLSYDPSDYWQSETYELCDFNHD
QDLEGMCNMGISGGMTEKDVYFGTPGSFTWQGTVHMKCRDTDSDYAGDANDRSFGKLGED
KFNIYIGYSVLEDIKLLDRSVFTVVMGAPRDEFKGSVILADKQDLILKQLMNITGEQIGS
YFGSCLAVTDLNNDDWNDLIVGAPFYFDRYKEEGGAVYIFMNENGSFQKKASLVLKGKKG
SGFGFAIAAVGDVNQDGFQDIAVGAPFQDSGKVYIWMGSKSGITKEPSQVIEGKSLGPSG
FQTFGYSLSGGMDMDGNDYPDILVGSLDDRIALLRSRPVIHLSKNFTVEPKIVIPSQCGN
SCIKVKVCFSYTLSNGNSNFRKEITVKFTIDADQNRRGARVRFIDNKQSTFTGLLSFSAS
SCQELELSVNNPVTDKLQPIVFSLNVSLNQQKAEAQQTLQSLDSFPVLSGQQILTDKAEI
NFHKECGDDNRCSSNLQLKARFADENYNPFPSQTLEFSSNVKKLVLMVEVSNTADENKPA
EDAHQATLNISIPYSLKYSGVRPPAGFDMECSADEAVICDLGNPFKSNQKVSFIIIFETS
GITLYTEQIQSQLQLSTISEQADLFPVLVTLNVKNTILTTFSLEKLIIDTSFSGNVIGES
AMSSTSDVGSPLEFVFRVQVLGEPLGDLGTLVIDFDWPYAVANGKWLLYLTEIVIKGSSE
SHCVPPGNIVNYLNLTLSKEGTKRNKREVDSGFPHAEASVTVLATRKVAHFLDCSKKTAL
CQTFSCPLLNMSTQAEVRVRARVWNGTLLEDYAKALRVEVKGQATLRLLTDKPAIKMDNQ
TREFSVNIDPVLGEETPYEVPLWIIIVAAVAGILLLGIISLILWKCGFFRRASRREMYEA
KSQKAEIKIQPSETERLTEEF
NT seq 3126 nt   +upstreamnt  +downstreamnt
atggccggaaagtctctgcacttgtgcgtcttcgtaatttgcgcaattcaaacgaacacc
ggatttaacattgacgtgcagttcccggttatcaaagaaggaaaaaccaagggcagtcta
tttggattctcagtggcactgcacaaacagaccgaaaaggcgaagaagaacttgctgtta
gtcggagccccacaagaaaaagcccagcctcaactcagtaaattcaaaattaatgaaact
ggagccgtgtattattgtcccatcactgttaacctggatgactgtggaagcatggacctc
atcagtccaccaaagtcgacggatatgctggagggaatgtggctaggagtgaccgtggcc
agtcagaggaatggaggccgtgtgctggcatgtggtcatcgctatgtcaaaaaactgctg
ggcgcagaagagcagcagcgtatggtgggcaaatgttacgtgcggggcaatgacctgagc
tacgacccatctgattactggcagtcggaaacctacgagctgtgcgacttcaaccacgac
caggacctggagggcatgtgtaacatgggtatatcaggaggcatgacggagaaagatgtg
tattttgggacacctggcagcttcacgtggcagggcaccgtccatatgaagtgcagagac
acagactccgattacgctggcgatgccaatgataggagctttggtaaactgggtgaggac
aagttcaacatctacataggttactctgtgctggaggacataaagttactggatcgctct
gtgttcactgtggtgatgggggctcccagagatgaattcaagggttcagtgatcctggcc
gacaaacaagacttgatactcaagcagctgatgaatatcacaggggaacaaatagggtcg
tactttggcagctgcttggcagtaacagacctcaacaatgacgattggaatgacctgatc
gtcggcgcgccattttatttcgaccgctataaggaggaaggaggtgctgtttacatcttt
atgaacgaaaacggatccttccagaaaaaagccagcctggttctgaagggtaaaaagggt
tctgggtttgggtttgccattgctgcggtcggagatgtcaatcaggatggatttcaagat
attgctgtcggcgctccattccaggactctggaaaagtctacatatggatgggaagtaaa
agtggaataactaaagaacccagccaggtgatcgagggtaagtcattgggtcccagtggt
tttcagacgtttggttattctctcagtggaggaatggatatggatggaaatgattatcca
gatattttggtgggctctttggatgaccgcatcgcactcttgaggtctcgtccggtcatt
catctctccaaaaacttcaccgtggagccaaagattgtgattccaagccagtgtggcaat
tcctgcataaaggtaaaggtgtgctttagttacactctcagcaatggaaacagcaacttc
aggaaggaaatcactgtgaagtttacgatagatgctgaccagaatcgcagaggtgctcga
gtacgctttatagacaacaagcaaagcacgtttacaggccttctgtctttctctgcttct
tcctgtcaagagctggagctcagtgttaataatccagtgacggacaaacttcagcccata
gtgttcagtctgaacgtgtctctaaatcagcagaaagcagaagcgcagcagacattacag
agtctagactctttccctgtgctgagtggacagcagatcctcaccgacaaagctgagatt
aatttccacaaggagtgtggagatgataaccgttgtagcagtaacctgcagctcaaggcc
aggtttgcagatgaaaactacaatccctttcccagtcagacgctggagtttagcagtaat
gtgaagaagctggtgctgatggtggaggtctccaacacagcggatgagaacaaaccggcg
gaggatgctcatcaggccacgctcaacatctccattccatactcactcaaatactcaggc
gtccgtcctccggctggttttgatatggagtgcagtgcagacgaggctgtcatatgtgat
ctgggaaacccatttaagagcaatcagaaggtctcatttataatcatctttgagacctct
ggtattacactttatacagagcagatccaatctcagctgcagctctccactattagtgaa
caggcggatctgtttcctgttcttgtcaccctcaatgtgaagaacacgatcctcactaca
ttttctttggaaaagctaataatcgacacgtcgttcagcggcaatgtgattggagaatct
gccatgagcagcaccagtgatgtggggagtccattggagtttgtgtttcgtgtgcaggtg
ctgggagaaccactgggagatctgggaactcttgtgattgactttgactggccgtatgca
gtagccaatgggaaatggctgctgtatctcacagaaatagtgatcaaaggatcatcggag
tctcattgtgtcccgccagggaatatcgtcaactatctaaacctcacactgtcaaaagaa
ggtactaaacgaaacaaaagagaagtggattctgggtttcctcacgctgaagcttctgtc
accgtcctggcgactcgtaaagtggcacattttctggactgttcaaagaagacggctctg
tgtcagaccttctcctgcccgctgctcaacatgtccacccaggcggaggtcagagttcga
gcacgggtgtggaacggcaccttgctggaggactatgccaaagccttgcgagtggaagta
aagggacaggctacattgagactgctgaccgataaaccggccatcaaaatggacaaccaa
accagagagttttcagtgaacattgatccggtgttgggagaagagacgccgtatgaagtt
cccctctggatcatcattgttgcagcggttgcaggaatactcttattaggcatcatcagt
cttattctctggaagtgcggtttcttcagacgggccagcaggagagagatgtatgaggcc
aaatcccagaaagcagaaataaagatccagccctctgagacagagaggctgacggaggag
ttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (53)   

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