KEGG   Danio rerio (zebrafish): 100332225
Entry
100332225         CDS       T01004                                 
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b precursor
  KO
K23619  collagen type XXVIII alpha
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dre01002]
    100332225 (col28a1b)
Peptidases and inhibitors [BR:dre01002]
 Peptidase inhibitors
  Family I2: Kunitz - BPTI family
   100332225 (col28a1b)
SSDB
Motif
Pfam: Collagen VWA VWA_2 Kunitz_BPTI VWA_3
Other DBs
NCBI-GeneID: 100332225
NCBI-ProteinID: NP_001289178
ZFIN: ZDB-GENE-160503-1
Ensembl: ENSDARG00000087087
UniProt: A0A060Q6E4
Position
16:47308856..47344147
AA seq 1109 aa
MNESVLLVCVSLWLLVSAARCQNRRQSGETPNNLTTKQDNACSLEVAFILDSSESAKGLL
FSRQKEFVRSFSRRLMEMQVSGWHLRTRLALIYYSSSVHINQHFNDWQDLDVFLDQLEDA
SYIGQGTYSTYAISNATQLFIRETSGQSVRVSLLMTDGSDHPRNPDIMTVVAEAKSHNIK
IFAIGLSMRAMDSNSAKLRAVASSPAQQYFHSLTDRGLEERLLQQIETIAKQDCPRPLVC
LCQKGDQGLPGAPGRKGDQGYEGAPGAKGSRGETGAPGLPGINGPEGRPGFKGDKGDQGN
CGPPGQKGYKGTEGPPGPRGPRGEQGLKGSPGDQGSEGQPGPKGDRGPTGASGLPGDIGV
GFPGPKGVKGNPGRAGPIGQVGIGQPGLPGPPGLQGIQGNPGAPGEGLPGEKGDRGYAGP
TGTRGPPGYGVKGAKGDAGPPGSPGPLGMPGRGIQGEKGNQGPVGPPGQRGNPGTGFTGP
KGEQGFPGNPGAPGQRGTGEPGPKGEPGLRGLAGDPGIPGQDGASGPKGEIGLPGAKGPD
GPPGRGLPGEKGDRGERGSRGQPGPTGPAGATGEKGNPGNVGPPGVPGPLGRGIPGAKGD
LGPVGPPGPAGEPGIGIAGPKGEIGLPGSFGPPGLKGEGYPGPPGPPGLPGLTGEIGPEG
IGLPGPKGERGPQGSPGPAGATGLGQMGPKGSIGLTGPVGPPGLPGEGIQGQKGEPGYQG
LQGPRGLTGEGLPGQKGDRGFQGAQGRKGEEGRQGEPGLTGPPGNAGKKGEPGLTREDII
FLIRSICGCGRICRVNPLELVFVIDSSESVGPENFEVIKDFVNTLIDRTSVSPEVTRVGI
VLYSNINLLVTNIQDRLTRDEVKAAVRRMPYIGEGTYTGSGIRKANEMFAFARPGVRKVA
MVITDGQTDHRDTVKLEDAVREAHLDNITMFAIGVVNQSDPIYDDFKQELKSIASPPTEE
HMFSVEDFRMLHELQSKLLQKVCENIDGSTFSSKPGAFEESGVFPYYDPESDIVGTIRPY
LEREDLILNLLPDFSSRRTTDPPLIFQQDFTADERCLQPLDPGPCREYVVKWYFDPKANS
CAQFWFGGCKGNKNQFDSELTCRKTCVRL
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgaatgaaagcgtgctgcttgtgtgtgtgagtctttggctgcttgtatccgcggccaga
tgccagaacagaagacagtctggagaaacaccgaacaacctcaccacaaaacaagacaat
gcgtgttcactagaggtcgccttcatcctggacagctctgagagtgccaaaggtcttctg
ttttcccgccagaaagagtttgtgcgcagcttcagtaggcggctgatggagatgcaggtg
tccggctggcacctgaggacacgtttggcgcttatctactacagcagttcagtgcatatc
aaccaacacttcaatgactggcaggacctcgacgtctttctggaccaactggaagatgcc
agctacatcggccagggcacgtactccacatatgccatttccaacgccacacaacttttc
atccgcgagacctcagggcagagtgtcagagtttcactgctcatgaccgatggctctgac
catccacgaaaccctgacatcatgacggtggtcgccgaagccaaaagccacaatatcaag
atctttgcgatagggctgtcgatgcgggcgatggacagcaacagcgctaaactgagggca
gtggcgagcagtccagcgcagcagtatttccacagcctcacagaccgtggcctggaggaa
cggctcctgcagcagattgaaacgattgcaaagcaggactgtcctcgtccgttggtgtgc
ttgtgtcagaaaggtgaccaaggtttgcctggagctcctggtagaaaaggagatcaaggt
tatgaaggagcaccgggtgcaaaaggctcaaggggggaaacgggagctccgggtcttcca
ggaatcaatggtccagaggggagacctggtttcaaaggtgataagggggatcaaggtaat
tgtggaccaccaggacaaaaaggatacaagggcactgaagggcctcctgggccgaggggc
ccgagaggagagcagggtctgaaaggatctccaggagaccagggaagcgaaggtcaaccg
ggacctaaaggggatcgggggccgactggtgcatctggtctaccaggagatattggagtt
ggattccctggtccaaagggtgtcaaaggaaacccaggaagagctggtcctattggtcaa
gttggaataggtcagccaggactacctggtccaccaggtttacaaggaatacaggggaac
ccaggagctcctggagagggacttccaggagaaaagggtgaccgtggctatgccggccct
acaggtacacgaggaccaccaggttatggagttaaaggtgcaaagggtgatgcaggacct
ccaggatcacctggaccattaggaatgcctggcagaggaattcaaggagagaaagggaat
caaggaccggttggtcctcctggtcaaagagggaatcctgggacaggattcacaggacca
aagggagaacagggatttcctggaaatcctggagcccctgggcaaagaggaactggagaa
ccaggaccaaaaggtgaacctggtttacgtggtttagcaggtgatccaggtattccagga
caagatggagcatctggacccaagggtgagataggcctaccaggagctaaaggaccagat
ggaccccctggaagaggcctaccaggagagaagggagatagaggagagaggggttccagg
ggtcaaccaggaccaacgggaccagctggggcaacaggggaaaagggaaacccaggaaat
gttggacctccaggtgttcctgggcctttaggacggggtataccaggagcaaagggggat
cttgggccagttggtccaccaggacctgctggagaaccagggattggtattgcagggcca
aagggcgaaataggattaccaggatcttttggaccaccagggctgaagggagaaggttat
cctggcccacctgggccaccaggccttccgggacttacaggggaaattggaccagagggt
attggtttaccaggaccaaagggtgaacgaggccctcaaggctcccccggcccagctgga
gcaacaggtcttgggcagatgggcccaaagggctctattggtctaacaggaccagttggt
cctccaggattaccaggagagggcatacaaggacaaaagggtgaacctggatatcaggga
ttacaggggccaagaggcttaactggagaaggcctgccagggcagaagggtgatcgtggg
tttcaaggagctcaaggacgtaaaggagaagaaggacgccaaggggaaccaggactaaca
ggaccaccgggtaatgcagggaaaaaaggagaacctggtctgacgagagaagacataatt
tttctgatcagatccatttgtggctgtggccggatctgcagagtgaatcctctagagctg
gtgtttgtgatcgacagctccgagagcgtcggcccggagaactttgaagtcattaaagac
tttgtaaataccttaatcgaccgcacatccgtcagtccagaggtcacccgtgtaggcatc
gtcctctacagcaacattaacctgctggtcacaaatatacaagacaggttaacccgggat
gaagtcaaagcagccgtacgcaggatgccctacatcggggagggaacttacacaggaagt
ggcatcagaaaagccaatgagatgtttgcttttgctcggcctggagtgaggaaagtggca
atggtcattaccgatggtcagacggatcatcgggacactgtgaagctggaggatgcagtt
agagaagcccatttagacaacatcaccatgttcgctataggggtggtcaatcagagtgac
cccatctatgatgattttaagcaggagctgaagtcaatagcttcaccacccactgaagaa
cacatgttttctgttgaggacttcagaatgctgcatgaattgcaaagtaaactgctccaa
aaggtgtgtgagaacattgatggatcaaccttcagttccaagccaggtgcatttgaggag
tctggcgtcttcccctattatgatcctgaatcagacattgttggcaccatcagaccgtat
ttggaaagagaggacctgatcctgaacctcctcccagatttctcatcacgcagaacgact
gacccaccactgatctttcagcaggattttactgcagatgagcgatgtctacagccgctg
gaccccgggccgtgtcgagagtatgttgttaaatggtattttgatccaaaggccaattct
tgcgctcagttctggtttggaggctgcaaaggcaacaaaaaccagtttgacagtgaactg
acctgcagaaaaacctgtgtgagactgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (45)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (64)   

Download RDF
DBGET integrated database retrieval system