KEGG   Danio rerio (zebrafish): 100333648
Entry
100333648         CDS       T01004                                 
Symbol
grin2cb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04020  Calcium signaling pathway
dre04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    100333648 (grin2cb)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    100333648 (grin2cb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dre04040]
    100333648 (grin2cb)
Ion channels [BR:dre04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   100333648 (grin2cb)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor NMDAR2_C
Other DBs
NCBI-GeneID: 100333648
NCBI-ProteinID: XP_009305071
ZFIN: ZDB-GENE-100308-2
Ensembl: ENSDARG00000077560
UniProt: E7FGL8 A0A8M3B7K5
Position
12:complement(31909346..32014613)
AA seq 1328 aa
MATPRGCLGPSLQLLFFFHLLLNVVPRCRGRPFFGPPSVNVAVVFSGSAHHSEIKGRLSP
ENFLDMPLEVNPITVLVNDTNPRALLTRLCQTMAAESLHGVVFEDDVDSEAVAQILDFVS
SQTSIPIVGISGGSAVVIPHKADGSTFLQMGASIDQQINAMFKVMEEYNWGNFVVITSLY
PGYETFVDYIRSFTDTSYFLWELQDVLSFEMSVGANDIRTRRLLQQVDSQVYLVYCSHEE
AQYLFRMASDVGLLGPGYIWIVPSLAVGNPEAAPPASFPVGVISIITDRWRKTLRQRVRE
GVAIIVKGVHSFHKHRGFIPEGHSDCSSPVKSYANNSLFRHMLNVSWEHKDLSFNSDGYL
TNPSMVIIALDRENHWDKVGSYEGGILQMRYPVWPRYGSFLEPVSDNRHLTVATLEERPF
VIVESVDPATGTCVRNTVPCRRQSNRTESIIGHTEPYTKLCCKGFCIDILKKLSRTIKFS
YDLYLVTNGKHGKMVRGVWNGMIGEVFYKRADMAIGSLTINEERSEIVDFSVPFVETGIS
VMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAP
GGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMI
QEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMIKYNQKGVE
EALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRP
IDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLV
FAWEHLLYWKLRHSVHKSDRLDFLLAISRGIYSCFNGVEDIGRSTGIQNPDITANYAQAN
MLKMLQTAKDIVSSAKVENSLDNATKTIENWSRRSGSLPARIPLVTTTEKVPGHFSYIAN
VAENHIPHMQRSITPPFTQHTTTTSPPLMVNHRVLTRPTPLRYTLPARTRGLYDGMLPVS
SLSTPHLAMHDPPSDLAHTGSSFVPYRDIYTEHHKSCHNDFSDAVRRKKRPQNLLVESMD
LRGLHDYKDQLTCHSEANCFPENHLSSSFSENPFVVADAACNSCAKTYFDPAFDEIPLIG
KRKLHRRPSFLKATWGPDRVKFPGDRPTAAPPSRVTIPDLFPCVDVHGRVRNTMCYAQPM
DHTYLHAFRRNSRKSQKLRHSQSTRLPSYKEAIFHNVAAVRRASSLVHRPYSYPELPVYQ
SPLSYGPAELCNIFPCMGHPSDSVYGGYRAPAQLQDGHLVPVPGSRVVHSSPIVPMTWGR
ISSLESEV
NT seq 3987 nt   +upstreamnt  +downstreamnt
atggccactcctcgagggtgtttgggtccctctcttcagctcctcttcttctttcatctg
ttactcaatgtagtgcctcgctgccggggacgtccattctttggcccaccttcggtcaac
gtggctgtggttttcagcggctcggctcatcacagtgagatcaagggccgtctgagtcca
gaaaacttccttgacatgccgctagaagtgaaccccatcaccgtgctggtgaacgacaca
aacccccgagctttactcacacgtctctgtcagactatggcggcggagagccttcacggc
gtggtgtttgaagacgacgtggactctgaggccgtggctcaaatcttagactttgtttcc
tctcagacgtccatccccatcgtaggcatcagtggaggttcagcggtggtcatcccacat
aaagcggacggttccacctttcttcaaatgggagcttctatagatcagcagataaatgca
atgttcaaagtgatggaggagtacaactggggcaactttgtggtgatcacaagcctgtat
cccggctatgagacctttgtggactacattcgctcattcacggacacaagctacttcctg
tgggagctgcaagatgtgctgagtttcgagatgtcggtgggcgcaaatgacatccgcaca
cgtcgacttctacaacaagtggactctcaggtgtatctagtgtactgttcccacgaagaa
gcacagtatttgtttaggatggcctctgatgtggggcttttggggcctggatacatctgg
atcgtccctagtctggctgtgggcaaccctgaagcggcccctccagccagcttcccagtg
ggcgtcatcagtattatcacagaccgctggaggaaaacactgcgccagagggttcgcgaa
ggagtggcaatcatagtgaaaggggtgcacagttttcacaagcacagaggattcattccc
gagggtcacagtgactgcagtagtcctgtcaaatcatatgccaacaattctctcttcagg
catatgctgaatgtgtcatgggagcataaggatctgtccttcaactccgatggctatctc
actaatccttccatggtgatcattgctctggatcgagagaaccactgggacaaggtggga
agctacgagggaggaattttgcagatgcgttatcctgtatggcctcgttatggcagcttc
ttggagcccgtgtcagacaaccggcatctgaccgtggccacgctggaggaacggcctttc
gtcatcgtagagagtgttgatcctgccaccggcacttgtgtgcgcaatactgtgccctgc
cgtcgacagtccaacaggactgaaagtataatcggtcacactgagccttacaccaaactc
tgctgcaaaggcttctgcatagacatcctaaagaagctctcacgcaccattaagttttca
tacgacctttatctggtcaccaatgggaaacatggcaagatggtccgtggcgtctggaat
gggatgattggagaggtcttctacaaacgtgcagatatggctattggctctctaaccatc
aacgaggagcgctcagagattgttgacttttcagtgccattcgtggagactgggatcagt
gttatggtggccagaagcaatggaacagtctcaccttctgccttcctggagccttacagt
ccagccgtgtgggttatgatgttcgtaatgtgcctgactgttgtggcagtcaccgtgttc
gtctttgagtacttcagccctgttggctacaaccggagccttgtcagtgccaaagcccct
gggggtccaacctttaccattgggaagtctgtttggctcctgtggggaatcgtcttcaac
aactctgttcctattgaaaaccccaaaggaacaaccagcaaaattatggtcctagtctgg
gcgttctttgctgtaatcttcctcgccagctatacagccaatttagcggccttcatgatc
caagagcagtacattgacaccgtgtctgggcttagtgacaagaagtttcaaaaaccccag
gaacattatcctccctttcgcttcggaacggtcccaaatggcagcacagagaggaacatt
cgaagcaattaccctgacatgcacacccacatgatcaaatacaaccagaagggagtggaa
gaagctctcaacagccttaagacagggaagttggatgccttcatatatgatgcagcagtt
cttaattatatggctggcaaggatgagggctgcaagctggtcaccattggtagcgggaag
gtgtttgctaccacaggctacggcattgctctgcagaaagactcccgctggaagcgcccc
atagacctggctcttctccagttcctgggagacggggacacacagagactggagacagta
tggctgtctggaatatgccagaatgagaaaaacgaggtcatgagctctaaactagacata
gacaacatggcaggtgttttctacatgttgcttgtggccatgggtctcagcctgctggtc
tttgcttgggaacatctactttactggaaactgaggcactctgttcacaaatctgatcgt
ttagactttctgctggccattagcaggggcatatacagctgcttcaatggagtcgaagac
attggcagatctactggcatacagaatccagatatcaccgccaattacgcccaggccaac
atgctgaaaatgcttcagacagccaaggacatcgtctcctctgccaaagttgagaactct
ttggataacgccaccaagaccattgagaactggagcagacggagtggcagcctcccagcc
cgtatcccactggtgacaaccacagaaaaagttcccggtcacttctcctatattgctaat
gtcgcagagaaccacatacctcacatgcagcgttccataactccacctttcacacaacac
accacaaccaccagcccaccgctaatggtaaaccacagagtgttaacacggccaactcct
ctacgctacacgcttcccgccaggaccaggggtctctacgatggcatgcttcctgtatcc
agtctaagcacaccgcatcttgccatgcatgaccctccatctgacctggctcacacaggt
tcctccttcgtcccatatagagacatttacaccgaacaccacaagtcctgtcacaatgac
ttctcagatgcagtcaggcggaaaaagaggccccaaaatctcctggtggagtctatggat
ttgaggggtcttcatgattataaagaccaattaacatgtcactccgaagcaaactgtttt
cctgaaaatcatctttcctcatccttcagtgaaaatccctttgtggtagcagatgcagct
tgtaactcttgtgccaaaacttactttgaccctgcatttgatgaaatacctttgataggg
aaaagaaagcttcatcgcagaccatcgttcctgaaagccacttggggtccagacagagta
aaattcccaggtgacagacccactgctgcacccccttctagagtaactatacctgatctg
ttcccttgcgtggatgtacacggacgggtgaggaacaccatgtgttatgctcaaccaatg
gatcacacctaccttcatgccttccggcgaaactccaggaaaagtcagaagctgagacat
agccagtccaccaggctgccttcctacaaggaggcgattttccacaatgtggcagcagtc
aggagggcatccagcttggtgcatagaccctactcctacccagagctgccagtctaccag
agcccactgtcatatggaccagctgaattatgcaacatcttcccgtgtatgggacatccc
agtgacagtgtatatggagggtatagggcacccgcacagctacaggatggccatctagtg
cctgttccaggcagcagggttgttcatagcagccctattgtgcccatgacatggggcaga
atttcaagtctggaatcagaggtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (46)   

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