KEGG   Danio rerio (zebrafish): 101886162
Entry
101886162         CDS       T01004                                 
Symbol
sprtn
Name
(RefSeq) DNA-dependent metalloprotease SPRTN
  KO
K24051  SprT-like domain-contaning protein Spartan
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    101886162 (sprtn)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    101886162 (sprtn)
SSDB
Motif
Pfam: SprT-like zf-WRNIP1_ubi PRP21_like_P XAF1_C
Other DBs
NCBI-GeneID: 101886162
NCBI-ProteinID: NP_001410794
ZFIN: ZDB-GENE-170317-1
Ensembl: ENSDARG00000104709
Position
20:complement(4035370..4050469)
AA seq 636 aa
MMEDEDFLLALRLQEQFDQETPAAGWPDEDCPSSKRRRVDPSGGLDVIPFTQPRAERPLS
IVDESWETLDPNPDVRAMFLQFNDKFFWGKLSGVEVKWSPRMTLCAGVCSYEGRGGLCSI
RLSEPLLKLRPRKDLVQTLLHEMIHALLFVTQNNRDRDGHGPEFCKHMNRINQASGTNIT
IYHSFHDEVDVYRQHWWRCNGPCQNRRPFFGYVKRAMNRPPSARDPWWADHQRSCGGTYT
KIKEPENYGKTGKSDKQRDKMPATEMPKKSKPPSSTSSSGSQDIRNIIPFSGRGFVLGGN
AQIPTNKQIQSPPKAPPEPLHSPPDSPLLPRLQLNEDNLKRLSSGTSNIPRKRSVGNTNA
FINVNGSPVRISNGNGSGGKQRSVRDLFQAIVLKSPDRGASAVGSSKSSTDASTADYRSN
SALDAKPSGKTSLITDHLSYTISGPKTLSAESNISKYFGGSAKTDVQDSKLKTFGSPQKS
AIGTPGYVSKAFGSNQRPDSTSSGIRNTGSPQRSHASATSGSSFKHFRGPAKPESNFPSP
RNIGSPRTSGTTPSGAKKRSWEEHNSERVFDYFQRTVGESATSTDKKREEVRSEAPPPVR
DQQANNPPAQITVHCPVCHIRLPESTINDHLDSCLL
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgatggaggatgaagactttttactcgctcttcgtttacaagagcagtttgaccaggag
acaccggctgctggatggcccgatgaggactgtccgtccagtaagaggcgcagggttgac
ccctccggtggtttggacgtgattcccttcactcagccccgagccgagagaccgctgtcc
atcgtggacgagtcctgggagaccctggacccaaaccccgacgtgagagccatgttcctg
cagttcaatgacaagttcttctgggggaaactcagcggtgtggaggtgaagtggagtcca
cggatgacgctatgtgctggtgtttgctcttatgagggaagaggaggtctgtgctctatt
cgactcagtgaaccactcctgaagctcagaccccgcaaagatcttgttcagactcttctt
catgagatgatccacgctctactttttgtgactcaaaacaacagagatcgagatggacac
ggcccagagttctgcaaacacatgaacagaatcaaccaagcaagtggcaccaacatcacg
atatatcactcctttcatgatgaggttgacgtgtacaggcagcactggtggcgctgtaac
ggaccctgtcagaatcgcagaccgttcttcggatatgtaaagcgtgcgatgaacagacct
ccctcggcccgggacccctggtgggctgatcaccaaaggagctgcggtggaacgtacacc
aaaatcaaagagccagagaattatgggaaaacaggcaaaagtgataaacagagagacaag
atgcctgccactgagatgccgaagaagtcaaagcctcccagcagcacatcaagttctggc
tctcaagacatcaggaatatcattcccttcagtggcagagggtttgttcttggaggaaat
gcacaaatacccacaaacaagcagattcaaagtcctcctaaagcgccaccagaacctctg
cattctcctccggattctccgcttcttccgagactgcagctcaatgaggacaacctcaag
aggctcagctcaggtacgtcgaatattccgcgtaaaaggtctgttggcaacaccaatgcc
tttatcaacgtcaatggctcgcctgtgagaatttccaatggcaatggctcaggaggcaag
cagcggtcagttcgagatctcttccaagcaatagttctcaaatctccagacagaggagcc
agcgctgttggatcttccaagtcttccacagatgcctcgacagcagactatagatctaat
agtgccttggatgcaaaaccttctgggaagacaagcctgatcactgaccatctctcatac
accatctccgggccaaagacactttcagcagagtcgaatatctccaaatattttggaggc
agtgccaaaacagacgtccaagattcaaagttgaaaacctttggaagcccccaaaagtct
gcaattggaacgccgggatacgtttctaaggccttcggaagcaaccaaagaccagattct
acaagctcaggaattcgaaacacgggaagtccccaaaggtcgcatgcttcggctacttcg
gggtccagtttcaagcactttagaggtcctgcaaagcctgaatccaattttccaagcccc
agaaacattggcagccctcggacatcagggacaacaccttcaggagccaagaaaagatca
tgggaagagcataactcagagcgtgtctttgattacttccagaggacagttggagagtcg
gccacgtccacagacaagaaacgagaggaggtcagaagcgaagctccgcctccggtcagg
gatcagcaggcaaacaatcctccagcccaaatcacagtccactgccctgtgtgccacatc
agactacccgagtccacaattaatgaccatttagattcctgtcttttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (41)   

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