KEGG   Danio rerio (zebrafish): 110438871
Entry
110438871         CDS       T01004                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03410  Base excision repair
dre04140  Autophagy - animal
dre04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110438871
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    110438871
  09143 Cell growth and death
   04217 Necroptosis
    110438871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    110438871
   03400 DNA repair and recombination proteins [BR:dre03400]
    110438871
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    110438871
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    110438871
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110438871
   MMR (mismatch excision repair)
    Other MMR factors
     110438871
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   110438871
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_box_5
Other DBs
NCBI-GeneID: 110438871
NCBI-ProteinID: XP_021328034
UniProt: Q6NX86
Position
10
AA seq 205 aa
MGKDPTKPRGKMSSYAYFVQTCREEHKKKHPEATVNFSEFSKKCSERWKTMSAKEKGKFE
DMAKLDKARYEREMKNYIPPKGEKKKRFKDPNAPKRPPSAFFIFCSEFRPKVKEETPGLS
IGDVAKRLGEMWNKISSEEKQPYEKKAAKLKEKYEKDIAAYRSKGKVGGGAAKAPSKPDK
ANDEDEDDDEEEDEDDDDEEEEDDE
NT seq 618 nt   +upstreamnt  +downstreamnt
atggggaaggatccgacaaaaccaaggggcaaaatgtcctcttacgcatactttgtccag
acttgccgagaggagcacaagaagaaacaccccgaggcgacggtcaacttttctgagttt
tccaaaaagtgctcagagcgatggaagactatgtcagccaaagaaaaagggaagtttgaa
gacatggccaaactggacaaggcacgttacgagagggagatgaagaactacattccaccc
aaaggcgagaagaagaagaggtttaaggaccccaatgctcccaagagacccccgtctgcc
ttcttcattttctgctccgagttccgacccaaggtgaaagaagagaccccgggtctgtct
atcggagacgtggccaagagactgggtgagatgtggaacaaaatatcatctgaagagaag
cagccgtacgagaagaaggccgccaagctgaaggagaagtacgagaaggacatcgctgcc
tatcgctctaaaggcaaagtgggaggaggcgcagccaaagccccatccaagccagacaag
gctaacgatgaggacgaagacgacgacgaagaggaggacgaagatgacgatgatgaagag
gaggaggatgacgagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (103)   
   KEGG ORTHOLOGY (1)   
   RefGene (99)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (117)   

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