KEGG   Danio rerio (zebrafish): 114454
Entry
114454            CDS       T01004                                 
Symbol
copb2
Name
(RefSeq) coatomer subunit beta'
  KO
K17302  coatomer subunit beta'
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    114454 (copb2)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    114454 (copb2)
Membrane trafficking [BR:dre04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    114454 (copb2)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   114454 (copb2)
SSDB
Motif
Pfam: Coatomer_WDAD WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 114454
NCBI-ProteinID: NP_001001940
ZFIN: ZDB-GENE-010724-7
Ensembl: ENSDARG00000038743
UniProt: Q6JWU7
Position
2:complement(38997357..39015074)
AA seq 934 aa
MPLRLDIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPV
RASKFVARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDD
MLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFT
LEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPE
LPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVSGLRGSNSVALGYDEGSIIIKLG
REEPAMSMDTNGKIIWAKHSEIQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQH
NPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSEYAIRESSSVVKIFKNFKE
KKSFKPDFGAEGIYGGFLLGVRSVNGLAFYDWENTELIRRIEIQPKHIFWSDSGELVCIA
TEESFFILRYLSEKVAASQENNEGVTEDGIEDAFEVLGEIQEVVKTGLWVGDCFIYTSSV
NRLNYFVGGEIVTIAHLDRTMYLLGYIPKDDRLYLGDKELNIVSYSLLVSVLEYQTAVMR
RDFGMADKVLPTIPKEQRTRVAHFLEKQGFKQQALAVSTDPEHRFELALQLGELKIAYQL
AVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNASMVAKLAEGAE
RDGKNNVAFMTYFLQGKLDNCLELLIKTNRLPEAAFLARTYLPSQVSRVVKLWRESLSKV
NQKAAESLADPTEYENLFPGLREAFVAEQYLKETSLGQTRPASDYPLITPNEERNVLEEA
SGYEPKGILPAPTQLKQEVSEDEEVLASVSSVSAVSSAQSQPDPKLQEKTEEKTPEITAA
EQKVIDELEDDLDNMEFDDIDTTDVNLDDGYVDD
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgcctctgaggctggacatcaagcgcaaactcacggctcgatctgaccgtgtcaaaagc
gtagaccttcatccgtccgaaccatggatgctggccagtttgtacaatggcagtgtctgt
gtgtggaaccatgaaacacaaactctggttaagacttttgaggtttgtgaccttccggtg
agagcttccaagtttgttgccaggaaaaattgggtcataactggcgctgatgacatgcaa
atccgagttttcaactacaacactctagagcgagtacacatgtttgaggcccattcagat
tatattcgctgcatcgctgtgcatcccacccagccctacatcctcacaagcagtgatgac
atgttgataaagctgtgggactgggagaagaaatggtcgtgcagtcaggtgtttgagggc
cacacacactacgtgatgcaaatcgtcatcaaccccaaagacaacaaccagtttgctagt
gcgtcgctggacagaacaataaaggtttggcaactgggttcatcttctcccaacttcact
ctggaaggtcatgataagggggtgaactgcattgattattacagtggaggagataaacct
tacctcatctccggagccgatgacagactggtcaaaatttgggactatcagaataagaca
tgtgtgcagacgctcgagggacatgctcagaatgtgtcctgtgtaaactttcacccagag
ctgcccatcatcatcactggatctgaggacggcacagtccggatctggcactccagcact
taccgtctagaaagcaccttgaactatggaatggagcgggtttggtgtgtgtctggcttg
cggggctccaacagcgtcgcattgggctatgatgaaggcagcatcattatcaagctcggc
cgtgaggagccagccatgtcaatggacaccaacggaaagatcatttgggccaagcactct
gagattcagcaggcaaacctcaaagccatgggggatgcagaaatcaaggatggtgagagg
ctgccactggcagtcaaggacatgggcagctgtgagatctaccctcaaaccatccagcac
aatcctaacggcaggtttgtggtggtgtgtggagatggagagtacatcatctacaccgcc
atggctctgagaaacaagagctttggttctgcacaggagtttgtttgggcccatgattca
tccgagtatgcaatccgggaaagcagcagtgtggtgaagatcttcaaaaattttaaggag
aaaaaatcttttaagccagattttggagcagaaggcatttatggaggcttcctactgggt
gttcgatctgtgaatggtttggctttctatgactgggaaaacacggagctgattcgacga
attgagatccagcctaaacatattttctggtcagactccggtgagctggtgtgcattgcc
acagaagagtccttctttatcctgcgctacctgtcagagaaggtggccgcatcacaggag
aacaatgagggggttactgaagacggtattgaagatgcttttgaggttctgggagagatt
caggaggtggtgaagactggtctgtgggtgggagattgtttcatctacaccagctcagtc
aaccgcctcaactactttgttggaggagagattgtcaccattgctcacttggacagaacg
atgtaccttctgggatacattcctaaagatgaccgtctttacctgggtgataaggagctg
aacattgttagttattctctcctggtgtctgtcctggagtaccaaactgccgtcatgcgc
agagactttggcatggcagataaagtgctgcccaccatccctaaagaacagagaaccaga
gttgcccacttcttagagaaacagggtttcaagcagcaggctctggctgtgtccactgat
ccagagcaccgctttgagctggcgcttcagttaggagagctgaaaatcgcataccagctt
gcagtagaagctgagtcggagcagaagtggaagcagttggcagagctggccatcagtaag
tgccagtttggactggcacaggagtgtcttcatcatgcccaggactatggaggtcttctg
cttctggccactgcatctggcaacgcctctatggttgccaagcttgcggagggagcagag
cgggacggcaaaaacaatgtcgcctttatgacatacttcctgcagggaaaattggacaac
tgtttggaacttctgatcaagaccaatcgtctgccagaagcagcctttcttgcccgcaca
tatctacccagtcaagtttccagggtggtgaagctttggagagagagtttgtctaaagtg
aatcagaaagcagcagagtctctggcagaccccacagagtatgagaacctgttcccaggc
ctgagagaggcttttgtggcagagcagtacctgaaagagaccagcctcggccaaaccaga
cctgcctctgactacccactcatcacgcctaatgaagaaaggaacgtgctggaggaggcc
agtggttatgaacccaaaggaattctccctgctcccacacagctgaagcaggaggtctcg
gaggatgaagaggttttggcctcagtctcatcggtgtctgctgtgagttctgcacagtcc
caacctgacccgaagctccaagagaagacagaagaaaaaactcctgaaattacagcagca
gaacagaaggtcatcgatgaacttgaggatgatttggataacatggagtttgatgacatc
gacaccacagacgtcaatctggatgacggctacgtagacgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (4)   
   Pfam (4)   
All databases (54)   

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