KEGG   Danio rerio (zebrafish): 192328
Entry
192328            CDS       T01004                                 
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    192328 (u2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    192328 (u2af1)
Spliceosome [BR:dre03041]
 Complex A
  U2 snRNP components
   U2 related factors
    192328 (u2af1)
 Complex B
    192328 (u2af1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4 zf-CCCH_2 GRP
Other DBs
NCBI-GeneID: 192328
NCBI-ProteinID: NP_803432
ZFIN: ZDB-GENE-020419-1
Ensembl: ENSDARG00000015325
UniProt: Q8JHJ3
Position
9:complement(9230448..9242690)
AA seq 249 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNTAQ
SADGLNAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREE
DAEKAVINLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISREL
RRELYGRRRKRHRSRSRSRERRSRSRGRNKGVGGAAAGGGGGGGGGGGGGGGRDRERRRS
RDRERSGRF
NT seq 750 nt   +upstreamnt  +downstreamnt
atggccgaatacttggcgtctattttcggtacagaaaaagacaaggtcaactgctctttc
tactttaaaattggagcctgtcgccatggagaccgatgctctagacttcataataaaccc
accttcagtcagaccattgccctgttgaacatctacaggaacccacaaaacacagcccag
tctgctgatggcttaaatgctgtcagtgatgtggagatgcaggaacattatgatgagttc
tttgaggaggtcttcactgaaatggaggagaaatatggagaggttgaggagatgaacgtc
tgcgataatttaggagatcacttggtgggaaatgtctatgtgaagttccgccgtgaagaa
gatgcagagaaagcggtgattaacctgaacaaccgctggtttaatgggcagcccattcat
gcggagctctcgcctgtcactgacttcagagaggcctgttgtcgacagtatgagatggga
gagtgcactcgaggaggcttctgcaatttcatgcatctgaagccaatctcaagggaacta
aggagagagctgtacggccgcagaaggaagagacatcggtcccgctctcgctcccgtgaa
cgacgctctcgctctaggggacgcaataaaggagttggtggtgcagcagcaggcggtggt
ggtggcggcggtggtggtggtggaggtggaggaggaagagaccgagagagacggcggtca
agagatagagagcgttctggaagattttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (56)   

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