KEGG   Danio rerio (zebrafish): 282667
Entry
282667            CDS       T01004                                 
Symbol
sdc2
Name
(RefSeq) syndecan-2 precursor
  KO
K16336  syndecan 2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04514  Cell adhesion molecules
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    282667 (sdc2)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    282667 (sdc2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:dre04090]
    282667 (sdc2)
   00535 Proteoglycans [BR:dre00535]
    282667 (sdc2)
CD molecules [BR:dre04090]
 Proteins
  282667 (sdc2)
Proteoglycans [BR:dre00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   282667 (sdc2)
SSDB
Motif
Pfam: Syndecan Glycophorin_A Cadherin_C_2
Other DBs
NCBI-GeneID: 282667
NCBI-ProteinID: NP_775330
ZFIN: ZDB-GENE-021206-3
Ensembl: ENSDARG00000002731
UniProt: Q66I66
Position
19:complement(47191403..47276297)
AA seq 208 aa
MRNFWMILTLGLTAFLSGERISVSAAKSPSTTDDLYLEEAGSGGYPEDDDDFSSGSGSGA
GEVIEDPVTVNTLFFVPKAEPTQDSTKDFTPKVETVTSQDAPKDSKKRRIEVAVPVTEDS
RRNPVTSTTSIPRPPMDPQDVQSENLFQRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRK
KDEGSYDLGERKPSGAAYQKAPTKEFYA
NT seq 627 nt   +upstreamnt  +downstreamnt
atgaggaacttttggatgattttaaccctcggcttgacagcctttctctccggggagcgg
atatcagtgtctgcggccaaatctccctccacgacagacgacctgtacctggaggaggct
ggatctggaggataccctgaagatgatgatgatttcagctccggatcgggatcaggagcc
ggagaggttattgaagatcccgtcacagtaaacacactgttcttcgtgcctaaagcagag
cccacgcaggactccaccaaagacttcacaccgaaagtggagacagtgacgtcacaagac
gcccccaaagactcgaagaaacgcaggatagaggttgcagttcccgtcacagaagactct
cgcagaaaccctgtcaccagcaccaccagcatccctcgacctcccatggatccccaagac
gtccagtcagaaaatcttttccagaggacagaagttctggcagctgtgattgcaggagga
gtgatcggcttcctcttcgccatcttcctcatcctcctgctggtttaccgcatgagaaag
aaggacgagggcagctacgatctgggagagaggaaaccgtccggagcggcctatcagaaa
gctcccaccaaggagttttacgcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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