KEGG   Danio rerio (zebrafish): 286774
Entry
286774            CDS       T01004                                 
Symbol
phf5a
Name
(RefSeq) PHD finger-like domain-containing protein 5A
  KO
K12834  PHD finger-like domain-containing protein 5A
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    286774 (phf5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    286774 (phf5a)
Spliceosome [BR:dre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    286774 (phf5a)
 Complex B
    286774 (phf5a)
 Complex C
   U2 SnRNP specific factors
    286774 (phf5a)
SSDB
Motif
Pfam: PHF5 PolC_DP2
Other DBs
NCBI-GeneID: 286774
NCBI-ProteinID: NP_775373
ZFIN: ZDB-GENE-021219-3
Ensembl: ENSDARG00000045155
UniProt: Q6YMR2
Position
12:19138474..19143678
AA seq 110 aa
MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVI
CGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
NT seq 333 nt   +upstreamnt  +downstreamnt
atggcaaaacatcacccagatttgatcttttgcagaaaacaggctggagttgccattgga
agactgtgtgaaaaatgtgatggcaaatgcgtgatctgcgactcttatgtcagaccgtgt
acactggttcgtatttgcgatgaatgcaactatggctcttaccaaggacgctgcgtgatc
tgtggaggtcctggagtgtctgatgcctattactgcaaagagtgcaccatacaggagaaa
gacagagacggctgtcccaagatcgtaaatctgggcagctcaaagactgatctgttctat
gagaggaaaaaatacggcttcaagaagaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (410)   
   KEGG ORTHOLOGY (1)   
   RefGene (404)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (423)   

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