KEGG   Danio rerio (zebrafish): 30310
Entry
30310             CDS       T01004                                 
Symbol
tcf3a
Name
(RefSeq) transcription factor 3a
  KO
K09063  transcription factor E2-alpha
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30310 (tcf3a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    30310 (tcf3a)
SSDB
Motif
Pfam: HLH
Other DBs
NCBI-GeneID: 30310
NCBI-ProteinID: NP_571169
ZFIN: ZDB-GENE-990415-51
Ensembl: ENSDARG00000005915
UniProt: Q90491
Position
2:complement(57302175..57378748)
AA seq 583 aa
MATVGTDMELNDLLDFSIMFPHPMSNGKSRGPNIPSSQFGLDDRNDSGSWGSEANSPSFG
ARLYGDGHHYPEHDNMYNLEIDGKSERGYPVTQLLPGEINIAASDALSPPGMKGSSQFYS
PHRRRPAESSIDPLPKKRKVPHGLPTSISAYPGSTGDDYNQDSAGYPGSKPGNLYPGFFN
VQEGLPDHWGQSGYPPVMSNFINPQKPQPLPVSPQNYPLHGSEVNLPSSFHSVPAGYGVP
NHTPPISSSEGIMGNRGANAGSSGAEIGKALASIYPSDNNGSNFSSTPSTPVGSPSNVAA
SASQWPKGSSQPAPSPGFEAGLAQSKLDDRLGEALHVLRNHHAVGTDMQSLLSAAISGHS
AGAAALGSLRQAFGLANRLPGLMSNHSEDAAGLPQSSALLQGHHTSHQPPPSSQSDTFTS
LSLARSSHASSSDIKREDKDDDENLSIADKSEDEKKDGKSRTRTSQDEDEDEDDEDLPVE
VKAERERERRMANNARERLRVRDINEAFKELGRMCQLHLSNEKPQTKLLILHQAVNVILN
LEQQVRERNLNPKAACLKRREEEKVTGEAQMLSGLGGDGHAHM
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggcgacggtgggcaccgacatggagctcaatgacctgttggatttcagtattatgttc
cctcatccaatgtcaaacgggaaaagcagaggccccaatatacccagcagtcagttcggt
ttagatgacagaaatgactccggctcctggggttcagaagcaaacagtccttcattcggc
gcacggctgtatggagacggccatcactatcctgaacatgacaacatgtacaacttagag
attgacggtaaatcagagcgaggttaccctgtcacacagctcctgccgggtgagatcaac
atcgcagcttctgatgctctttctcctcctggaatgaaaggctcttctcagttttacagt
ccgcaccgccgcaggcctgcagagtccagtatagatccactgcccaaaaagaggaaggtt
cctcacggcctgccgacgtccatatcggcgtatccaggctctactggtgacgattataac
caggacagcgccggataccccggatccaaacctggaaacctttatccaggtttttttaat
gtccaagaaggactcccagatcattggggtcagtctggatatcctccggtcatgagcaac
ttcataaacccacagaagcctcagccgctgccggtgtctccgcagaactaccctcttcac
ggcagcgaggtcaatttaccctccagcttccactcggttcctgcaggttacggcgttccc
aaccacacaccacccatcagctccagcgaaggcatcatgggaaacagaggagcaaacgct
ggcagctccggtgcagagatcgggaaagctctggcttcgatatatccatcagacaataat
ggcagcaacttctcctcgacgccgtccactcctgtgggctctccttctaatgtggccgcc
tctgcatctcagtggcccaaaggctcctctcagcctgcgccatcgcctggttttgaagca
ggattggcacagagtaagctagatgaccgtctgggtgaagcgctgcatgtgttgaggaat
catcatgcggtgggcacagatatgcagagtttgctgagcgctgccatctctggtcattcg
gctggtgctgcggctctgggctccctacgtcaggccttcggtctcgccaaccgtctgccg
ggcctgatgtcaaatcacagtgaagacgccgcaggtttaccgcagtccagtgctcttctg
cagggacaccacacttcccatcagcctccaccgtcctctcagtctgacaccttcaccagt
ctctctttggctcgctcgtctcacgcctccagctcagatataaagagagaagacaaagac
gacgatgagaatctgtctatcgcagataaatcagaggatgagaagaaagatggaaaaagc
cgcacgagaacgagtcaagacgaggacgaagacgaggatgatgaggatctgccggtggag
gtgaaggcggagcgggagcgtgagcggcgaatggccaataacgcccgcgagcgtctgcgt
gtgcgcgacatcaacgaggccttcaaagagctgggccgcatgtgccagctgcacctgagc
aatgagaaaccgcagaccaaactgctgatcctgcaccaggccgtaaacgttattctcaac
ctggagcagcaagtacgagagcgtaacctgaacccgaaggcagcatgtctgaagcggcgg
gaggaggagaaggtgacgggtgaagcgcagatgttgtctggtctaggtggagatggacac
gcacacatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (31)   

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