KEGG   Danio rerio (zebrafish): 30399
Entry
30399             CDS       T01004                                 
Symbol
tbxta
Name
(RefSeq) T-box transcription factor T-A
  KO
K10172  brachyury protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30399 (tbxta)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Other transcription factors
   T-box
    30399 (tbxta)
SSDB
Motif
Pfam: T-box
Other DBs
NCBI-GeneID: 30399
NCBI-ProteinID: NP_571237
ZFIN: ZDB-GENE-980526-437
Ensembl: ENSDARG00000101576
UniProt: Q07998
Position
19:complement(14187540..14191592)
AA seq 423 aa
MSASSPDQRLDHLLSAVESEFQKGSEKGDASERDIKLSLEDAELWTKFKELTNEMIVTKT
GRRMFPVLRASVTGLDPNAMYSVLLDFVAADNNRWKYVNGEWVPGGKPEPQSPSCVYIHP
DSPNFGAHWMKAPVSFSKVKLSNKLNGGGQIMLNSLHKYEPRIHIVKVGGIQKMISSQSF
PETQFIAVTAYQNEEITALKIKHNPFAKAFLDAKERSDHKEVPDHSTDNQQSGYSQLGGW
FLPSNGPMGPSSSPPQFNGAPVHSSGSYCERYSSLRNHRAAPYPSHYSHRSTTTNNYMDN
SSGSLASHDSWSALQIPNSSGMGTLAHTTNTTSNTSQYPSLWSVAGTTLTPSGSASGSIT
GGLTSQFLRGSSMSYSGLTSSLPVSSPSSMYDPGLSEVGVGDAQFESSIARLTASWAPVA
QSY
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgtctgcctcaagtcccgaccagcgcctggatcatctccttagcgccgtggagagcgaa
tttcagaagggcagcgagaaaggggacgcgtccgagcgggatattaaactttcgcttgaa
gacgcggagttgtggaccaaatttaaagagctcaccaatgaaatgattgtcaccaagact
gggagacgaatgtttcccgtgctcagagccagtgtcaccggtctcgaccctaatgcaatg
tactcggtcctgctggattttgtggcggccgataataatcggtggaaatacgtgaacggt
gaatgggtgcccggtgggaaacccgaaccccaaagcccgagctgcgtctacatccacccg
gactcacccaacttcggcgcgcactggatgaaagcacccgtatctttcagcaaagtcaaa
ctctccaataaactcaacggaggaggacagattatgttaaactcattgcacaaatacgaa
cccaggatacacatcgtgaaagtcggtgggattcagaaaatgatcagcagtcagtctttt
cctgagacacagtttattgcagtcacagcatatcagaatgaagagattaccgctctgaaa
atcaaacacaatccttttgccaaagctttcctcgatgccaaagagagaagtgaccacaag
gaagtcccagaccacagcactgacaaccagcaatctggatattcacaactcggtggctgg
ttcctgcccagtaacggccccatgggccccagcagcagccctcctcagttcaatggggcc
cctgttcactcctcgggttcgtactgtgagagatactccagcttgaggaaccacagagct
gctccatatcccagccattactcccaccgcagcactaccaccaataactacatggacaac
tcttccggaagtcttgcgtctcatgacagctggtcagccctgcagatccccaactccagc
gggatgggaaccctggcccacaccacaaacactacctccaacaccagtcagtacccaagt
ctgtggtcagttgcagggacgactctcaccccatcaggctcagcatcgggctccattaca
ggtggcctgacatctcagttcctacgcggttcttcgatgtcctactcgggtctgacctcc
tcgctgcctgtgtcctctccctcctcaatgtacgatccaggcctaagcgaggttggcgtt
ggagatgcccagttcgagagctccatcgcccggctcacagcatcatgggcgcctgtggct
cagagctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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