KEGG   Danio rerio (zebrafish): 30556
Entry
30556             CDS       T01004                                 
Symbol
tcf7l1b
Name
(RefSeq) transcription factor 7-like 1-B
  KO
K04490  transcription factor 7-like 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04310  Wnt signaling pathway
dre04520  Adherens junction
dre04916  Melanogenesis
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    30556 (tcf7l1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    30556 (tcf7l1b)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    30556 (tcf7l1b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    30556 (tcf7l1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30556 (tcf7l1b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    30556 (tcf7l1b)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 30556
NCBI-ProteinID: NP_571371
ZFIN: ZDB-GENE-991110-10
Ensembl: ENSDARG00000007369
UniProt: F1R336
Position
8:complement(52107747..52230115)
AA seq 550 aa
MPQLNGGGGDELGANDEMISFKDEGEQEDKISENVSAERDLDDVKSSLVNESENNSSSSD
SEQTERRPQPRADLESYEKAREYFTEALRRQQDGCFFKSPHYPGYPFLMIPDLANPYLSN
GALSPSARTYLQMKWPLLDVPGSAALKDSQSPSPGHLSNKVPVVQHAHMHPLTPLITYSN
EFPPGTPPAHLSPEILDPKTGIPRTPHPAELSPYYPLSPGAVGQIPHPLGWLVPQQGQHM
YPITAGGFRHPYPALAMNASMSSLVSSRFSPHLVPHHPHGLHQTGIPHPAIVSPVIKQEP
NGELSPPVNTKSPGPNKKDEDKKPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQIL
GRRWHSLSREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKRDNKTDSTPEDFSM
RSKKPCVQYLPQEKMIDSPGSSHGSMLDSPATPSAALASPAAPAATHSEQAQPLSLTTKP
ERFPLLSKPPPSSSSSSSSSSSGLPTPPLLSRPLPFALLTPPSPFHQAALHSHHALFQSQ
PLSLVTKSSD
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgccgcagcttaacggaggcggaggggacgagctcggggccaacgatgaaatgatctca
tttaaagatgaaggcgaacaggaggacaaaatctccgaaaacgtgtccgccgagagagat
ctggacgatgtgaagtcgtctctggtgaatgagtcggaaaataacagcagctcgtccgat
tctgagcaaaccgagaggcgacctcaaccaagagcagatctcgaaagttacgagaaagcc
cgagagtatttcaccgaagctctgagaagacagcaagatggatgcttttttaagagcccc
cattatcctggctacccgtttctaatgatcccagatctcgccaatccttacttgtccaac
ggcgccctgtctccgagcgcaagaacgtatctgcagatgaagtggcctcttctggatgtt
ccaggatcagcggcgctcaaagattcacagtcgccttcaccaggacacttatctaataag
gtcccggtggtccagcacgcacacatgcacccgctgacgcccctcatcacatacagcaat
gagtttcctccaggaactcctccagcacacctctcgcctgagatactcgatccaaagaca
ggtattcctcgcacgccccacccggcagagctctcaccgtattaccctctgtctcctgga
gccgtggggcagatcccgcacccgctgggctggctcgttcctcagcaagggcagcacatg
tatcccatcaccgccgggggtttccgtcacccgtatccagctctagccatgaacgcatcc
atgtccagtttggtgtccagtcgcttttctcctcacctcgtccctcatcatcctcatggt
cttcatcagacgggcatccctcatccggccatagtctctccagtcatcaaacaagaaccc
aacggagagctcagtccgccagttaacacgaagtctccaggccccaataagaaagacgag
gacaagaaacctcacataaagaagcctctgaacgcgttcatgctctacatgaaggagatg
agggctaaagtagtggccgagtgcacgctgaaagaaagcgccgccatcaaccagatcctc
ggccgcaggtggcattcgctatcacgagaagaacaggccaaatactacgagctggccagg
aaagagcggcagctgcactcacaactatatccaggctggtctgccagagataactacggc
aaacgcaagaagaggaagagagataataagacagactcaacaccagaggatttctccatg
cggagtaagaagccatgtgtgcagtaccttcctcaggagaagatgattgacagcccaggc
tcctcccacggcagcatgctggactctccggccacgccctctgcagctctggcatcaccc
gctgcaccagccgccacacactctgagcaggcgcagccgttgtccctgaccaccaaacca
gagagattcccgctgctgtccaaaccaccgccatcttcatcatcatcatcatcctcctcc
tcctctgggctgccaactccgccccttctctccaggccactccctttcgccctcctcact
ccgccctctccgttccaccaggccgctcttcattcccatcatgctctgttccagtcgcag
ccgctttctctggtcaccaaatccagcgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (51)   

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