KEGG   Danio rerio (zebrafish): 30587
Entry
30587             CDS       T01004                                 
Symbol
pax7a
Name
(RefSeq) paired box protein Pax-7a isoform PAX7C
  KO
K09381  paired box protein 3/7
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30587 (pax7a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    30587 (pax7a)
SSDB
Motif
Pfam: PAX Pax7 Homeodomain Homeobox_KN HTH_23 HTH_32 HTH_Tnp_IS1
Other DBs
NCBI-GeneID: 30587
NCBI-ProteinID: NP_571400
ZFIN: ZDB-GENE-990415-201
Ensembl: ENSDARG00000100398
UniProt: O57418
Position
11:41242974..41373311
AA seq 507 aa
MATLPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKRIEE
YKRENPGMFSWEIRDKLLKDGVCDRGTVPSGEASSVSSISRVLRARFGKKDDDDECDKKD
EDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE
RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM
PTLPTYQLPESTYPSTTLSQDGSSTLHRPQPLPPSSMHQGGLSADSGSAYGLSSNRHTFS
SYSETFMSPTASSNHMNPVSNGLSPQVMSILSNPSAVPSQPQHDFSISPLHGGLEASNPI
SASCSQRSDPIKSVDSLASTQSYCPPTYSATSYSVDPVTAGYQYSQYGQTAVDYLAKNVS
LSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggctactttaccaggaacagttcctcgaatgatgcggccagcaccaggccagaactac
ccacgaaccggattcccattagaagtctcaacacctctgggtcaaggtcgagtcaatcaa
ctcggtggagttttcatcaacggaaggcctctgcctaatcatattcgacacaaaatagtg
gaaatggcccatcacggtatccgaccctgtgttatctccagacagctgcgggtctcacac
ggctgcgtgtccaaaatcctctgcaggtaccaggagaccgggtctatccgcccgggtgct
attggtggaagcaaaccgaggcaagttgcaacacccgacgttgaaaagagaattgaggaa
tacaaacgtgagaatccagggatgttcagctgggaaatccgggataagttgctgaaggac
ggagtgtgtgacagaggcacggttccttcaggtgaggcctcttccgttagctccattagt
cgggttttgagagctcgctttggcaagaaagatgacgatgacgagtgtgataaaaaagat
gaagacggagaaaagaaaaccaagcacagcattgacgggattctcggggataaaggtaat
cgcacggacgaaggttcagacgtggagtcagagccagaccttcctctgaagaggaaacag
agacgcagtcgtaccacattcacagcggagcagttggaggagctggagaaggccttcgag
aggacacactaccctgacatctacaccagagaggagctcgcacagagaaccaaactgacc
gaggctcgtgtacaggtctggtttagcaacagaagagcaaggtggcgcaaacaagccgga
gcgaatcagctggcagctttcaaccacttgttgcctggagggtttccacccaccggaatg
ccaactttacccacctatcagcttccagagtcaacgtatcccagcaccactctctcacaa
gacggcagcagtacgttgcatcggccgcagcctcttcctccctcctccatgcatcagggc
ggactctcggctgacagcggctccgcctacggcctctcctccaaccgccacaccttctcc
agctattcagaaaccttcatgagcccgaccgcttccagcaaccacatgaatcctgtgagc
aacggcctctcgccacaggtgatgagtattttgagtaaccccagtgctgtcccgtctcag
ccgcagcatgatttctccatctctcctctgcacggcggtctggaggcgtccaaccccatc
tccgccagctgcagccagcgctcggaccccatcaagagtgtggacagtctggcctcgact
cagtcctactgtcccccgacatacagcgccaccagctacagcgtcgaccccgtcactgcc
ggataccagtacagccagtatggccaaactgctgtggactatctggccaagaatgtgagt
ctgtccactcagagacggatgaagctgggcgatcattcagcggtgctgggactcctgcag
gtggagacaggacaggcctactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (19)   
   RefSeq(nuc) (5)   
   GenBank (7)   
   EMBL (7)   
Protein domain (7)   
   Pfam (7)   
All databases (47)   

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