KEGG   Danio rerio (zebrafish): 321979
Entry
321979            CDS       T01004                                 
Symbol
safb
Name
(RefSeq) scaffold attachment factor B1
  KO
K25092  scaffold attachment factor B
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    321979 (safb)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    321979 (safb)
SSDB
Motif
Pfam: RRM_1 SAP RRM_5
Other DBs
NCBI-GeneID: 321979
NCBI-ProteinID: NP_999848
ZFIN: ZDB-GENE-030131-698
Ensembl: ENSDARG00000020467
UniProt: Q803X6
Position
22:complement(15695746..15704704)
AA seq 855 aa
MSDTSTGDVGSVEPGVRKISELRVIDLKAELKRRNLDISGNKSLLSERLKKAIEEEGGNP
DEIVVHLDITPKKTPRRTPKGKRQDDHDGPEDSTLEEDSVDGQEDPDAVPENLHEMDIMD
MNVLDEADMGNGGDPDEDEYDEEVLDTYSNEENTGGLKEDATNNCGTEDGVDIVMSKPEV
EEAVEKDDADMDENQEMACQEDVGEHGNKEAKSEEESEKVAGSCISEPLKDDSTEELTEE
EKSSVWDSHQEADNGHDLANTDEAANLDPESSTCKLDIVASKESEVELTNKDQENIQDSL
VDAENTSAQADNASETGLRDIESAVDSEMASKGEAVEECKSTDPAESSEVKESSVQGDDQ
KKSEEEDASTKPESKDDKGGASSGRNLWVSGLSSTTRATDLKNLFSKYGKVVGAKVVTNA
RSPGARCYGFVTMCSIEEATKCISHLHRTELHGRMISVERAKNEPAGKKPADKNDAKKSV
SDRRLSSDSKTDKSENKDEKTEGDGKGGERTVVMDKSKGEPVISLKTKSKERSSKSRDRN
SLSKERKDILSFDQIKEQRERERQRQREREIREVERRRNSGERDRDRDRRSERERIRLFR
EKEERLMRKRKMLEVEKQRLDADRMEREFLERERLRVEYERRREQERIHREREELRRQQE
QLRFEQDRRPVKRPYDMDGRKDDWPLKRMNMDDRYGRSDFGRQDRYQDFDHRDRNRYQDD
MMMDRRDNRGGMPGDRDNQHFSDRDRHGRDNWGGGSYDKRGINPARPGPGGRGDRDWEPG
RKMDGDRNWQGGERGVPGQGHMARGGMAGRGGYMQAGASQSISGPINRPNQMMQGSGMQG
GGGAGAGGGAFGRRY
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgtcagacacttcgacgggagatgtggggtctgtagagcctggcgttcgtaaaatatcc
gagctgagagtcatcgatttgaaggccgagctgaagcgccgaaacctcgacatcagcggc
aataaaagcctgctttcagagagacttaaaaaggcaattgaagaagaggggggaaatcca
gatgagattgttgtacatcttgacataactcctaagaaaacaccacgtcgaactccaaaa
ggaaagagacaagatgaccatgatggacctgaagactccacacttgaggaggactctgtt
gatggccaggaggacccagatgctgtgccagagaaccttcatgagatggatatcatggac
atgaatgttctggatgaagccgatatgggtaatggaggtgaccctgatgaagatgaatat
gatgaggaggttttagacacgtattcgaatgaagagaacacaggcggcttgaaggaggat
gccacaaataactgcggcacggaggatggtgtagatattgtcatgagcaaacctgaagtg
gaggaggcagtggagaaagatgatgcagacatggatgagaaccaggaaatggcttgtcag
gaggatgttggtgagcatggaaacaaggaagcaaaaagtgaagaagaaagtgagaaagta
gccgggtcttgtatatcagagccgcttaaggatgactccactgaagagctgactgaagaa
gagaaatcttcagtctgggattcacaccaagaggcagacaatgggcacgaccttgccaac
accgacgaggctgccaatttggatccggagtcatcaacctgcaaactggacattgttgca
tcaaaggaaagtgaagttgaattgacaaacaaagaccaagaaaacattcaggacagtttg
gtggatgccgagaacacttctgctcaggccgataatgctagcgaaacaggtttgcgcgat
atcgaaagcgcagttgattcggaaatggcatctaaaggagaagcggtcgaggaatgcaag
agcactgatcctgcggagtcctcagaagtgaaagagtcctctgtacagggtgatgatcag
aaaaagagtgaagaggaggatgcctcaaccaagccggagtcgaaagatgacaaaggtggc
gcctctagtgggaggaacctctgggtcagcggactctcgtcaaccaccagagcgactgat
ctgaagaatcttttcagcaagtatggcaaggttgttggtgcaaaagtagtaacaaatgcc
agaagcccaggcgctcgctgctatgggtttgttacaatgtgctctattgaggaggccaca
aagtgcattagccatctgcacagaaccgaactccatggaaggatgatttcagttgaaagg
gccaagaatgagcctgctggaaagaagcctgctgacaaaaatgatgccaaaaagtctgtc
agtgatagaagactctcctctgactcgaagactgacaaatctgagaacaaggatgaaaag
actgaaggtgatggaaaaggtggagagaggactgttgtgatggacaaatcgaaaggagaa
ccagtcatcagcttgaaaacaaaaagcaaagaacggagctctaagagtcgtgaccgtaat
tcgttgagtaaagaaagaaaggacattttgtcatttgatcaaatcaaagagcaaagagag
cgggagcgtcaaaggcaaagggaacgagagattagagaagttgagagacgcagaaactct
ggtgagcgagaccgtgacagagacagacgttctgagcgtgagcgcattcgacttttccga
gagaaggaggagaggctgatgaggaagcgcaagatgctggaggtcgagaagcagcgtctg
gatgctgaccgcatggagcgggaattcctagagcgggagcgtctccgagtagagtatgag
cggcggcgcgaacaggagcgcattcatcgtgagagggaggagctgaggcggcaacaggag
cagctacgctttgaacaggacagacgtccagtcaagaggccttatgacatggatggaaga
aaagacgactggccattgaagaggatgaacatggatgatcgctatggacgatctgatttt
ggacgccaagaccggtatcaagattttgaccacagagaccgcaatcgctatcaggatgac
atgatgatggatagaagagacaaccgaggtggcatgcctggagacagagacaaccagcac
ttttcagatcgggacagacatggtcgtgacaactggggtggtggcagctatgacaaacgt
ggaataaatcctgcaaggccagggccaggcggtcgtggggacagagattgggagcctgga
cgcaaaatggatggggacagaaactggcaaggaggagagcgaggtgtcccgggacagggt
cacatggctcgaggaggaatggcgggccgaggtggatacatgcaggcaggggcatcccag
tcgatttctggacccataaaccgacccaatcagatgatgcagggtagtggaatgcaaggt
ggtggtggtgctggtgccggtggaggagcctttggtcgacgatattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system