KEGG   Danio rerio (zebrafish): 326668
Entry
326668            CDS       T01004                                 
Symbol
ss18
Name
(RefSeq) protein SSXT isoform 2
  KO
K15623  protein SSXT
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    326668 (ss18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    326668 (ss18)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    326668 (ss18)
   GBAF(ncBAF) complex
    326668 (ss18)
SSDB
Motif
Pfam: SSXT
Other DBs
NCBI-GeneID: 326668
NCBI-ProteinID: NP_001278254
ZFIN: ZDB-GENE-030131-4867
Ensembl: ENSDARG00000002970
UniProt: A0A0R4IPF8
Position
2:complement(1348263..1364678)
AA seq 327 aa
MSVAFAPHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMNQSGATPQLPHGHSMPSEGPTAPHMQSQMNGQMPG
PNHMSMQGPGPNQSSSIPSGSMNIPPSSHGSMGAYNHAVPSSQGIQSQGQMNINQGQPMG
NYGPRPNMNMQPNQGPMMHQQAPSQQYNMPPSGGSGQHYQGQQNPMGMMGQGNHVMGQRP
MPPYRPPHQGPPQQYPGQDEYYTEQYSHGGQGAPEGPSQGAPSQYPNYPQSQGQQYSAYR
APQPGPPQGQPQRPYAFDQGQYGNYQQ
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtctgtggcttttgcaccgcaccggcagcgtgccaagggcgatataacgcctgccggg
atacagaagttactggatgaaaacaatcagctgattcagtgcatcatggacttccagagt
aaaggaaaaacagctgaatgttcacactaccaacagatgctgcacagaaatctggtgtat
ttggcgacaatagcagactctaatcagaacatgcagtctctgctccctgcgccgcccact
cagaacatgcctatgaatcagagcggagccactcctcagctgccccacggtcacagtatg
ccctcagagggtcccaccgccccacacatgcagagccagatgaacggccagatgccaggt
ccaaatcacatgtcgatgcagggtccggggcccaaccaatcatccagcatacccagcggc
tccatgaacataccacccagcagccacggctccatgggggcttataaccacgccgtgccc
tcctcacagggcatacagtcacaggggcagatgaacatcaaccaggggcagcccatgggc
aattatggccctcgacccaacatgaacatgcagcccaatcaggggcctatgatgcaccag
caggctccttcccagcagtacaacatgcccccctctggtggcagcgggcagcattaccag
gggcagcagaaccccatgggcatgatggggcaaggcaatcacgtgatggggcagaggcca
atgccgccatacaggccaccacatcaaggacctcctcagcaatatcccggtcaggatgaa
tattatacggagcaatacagccatggaggacagggggcaccagagggtccatcacaaggc
gctccaagtcagtacccaaactacccgcagagtcaagggcagcagtattcagcctacaga
gccccgcaacccggaccaccacagggacaaccacagcgcccgtatgcttttgaccagggt
cagtatggaaactaccagcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (38)   

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