KEGG   Danio rerio (zebrafish): 327429
Entry
327429            CDS       T01004                                 
Symbol
cntn5
Name
(RefSeq) contactin-5
  KO
K06763  contactin 5
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    327429 (cntn5)
Cell adhesion molecules [BR:dre04515]
 Immunoglobulin superfamily
  Contactins
   327429 (cntn5)
SSDB
Motif
Pfam: I-set Ig_3 Ig_2 ig fn3 V-set Ig_5 Ig_C17orf99 C2-set_2 Pur_ac_phosph_N Interfer-bind Sp38
Other DBs
NCBI-GeneID: 327429
NCBI-ProteinID: NP_956098
ZFIN: ZDB-GENE-030131-5640
Ensembl: ENSDARG00000021584
UniProt: Q7ZW34
Position
18:complement(42150949..42408365)
AA seq 1056 aa
MKADSSSSSSMSSRMRLRNSHGVGSSSQDWSPFSRHRYSALSSQEDYRSEESEEFGPVFI
QEPDDAIFSLDSDDKKIIMNCEARGNPVPTYSWLINGTNVDTEADFRYSLIDGNLIIHNA
SEVIDYGRYQCRAENSIGIVLSRDALLQFAYLGPFSGKTRGAVSVREGQGVVLMCAPPSH
SPEIIYSWVFNELPSFVAEDSRRFISQETGNLYIPKVQPSDVGSYVCQVKNTVTNARVLS
PPTPLTLKTDGVMGEYEPKIEAHFPQTVLAAKGVTVRLECFALGNPVPTITWRKMSGNIP
KKARLRKSQAVLEIPNIQLEDSGSYECKAENTRGGTAFRGHLQVYTLPQWISMINDTQLD
SGEQLRWECRATGKPRPTYRWLRNGEPLSTQSRVEMVNGELTIHRLQQADSGMYQCIAEN
KYGAIYSSAELKILASAPMFNNNPVRLIATVGKDVSLECRPRASPKPRISWRKNDRRLQP
SRRIMLLRNNTLRIINSSRSDEGSYVCRAENQFGSAELTTVLLVKEPMRVELSPLRVEVT
VGESVVLSCKVTHDPSLDVSFLWLLNNQPLNTQQDGGHFEYIQTQSSTADLMIRSILLKH
AGKYGCRAQTSTDSVLAEAELLVRGPPGPPGVVIVEEITASTATLSWSHGVDNHSPITTY
NVQARSPVSLGWQTVKTDPDPVTGSMESAMAVDLNPWVEYEFRVVATNSIGTGDPSPPSR
AVRTKEAVPSVAPANVRGGNGRRHELVISWEPVSEEYQNGEGFGYIVAFRVNGTRGWKEK
MVTSADSTTYKYRDETFPPLTPFEVRVGVYNNKGDGPFSEVVTVFSAEGEPREPPSEVQA
FAVSSSEIKVLWKPPSPGLGRPQGYEVSFWKDVEQEELGKKKRTLGNETNMLLSGLDGNT
QYLVSVKGFNSAGQGPSSTAVKISTKKNAPSLPPGNLMWIQEGNNVSLSWDPVKARDNES
EVIGYKVLLRQEGRGHSQVMRTPNSAVVLTLPEGGTYIIEVRAVSEGGEGAASAQVRVLT
SSGVRAKNGQLSVQNSPPGLAWTALFLSLMVPSFPL
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgaaggcagacagttcgtcctcctcctccatgagctccagaatgaggttaaggaacagc
catggagtgggatcatccagccaggactggtctccgttctccagacacagatactcagcc
ctcagctcacaggaggactacaggagcgaagagagcgaggagtttggtccggtgttcatt
caagagcctgacgatgcaattttttccttggattcagacgataagaaaatcataatgaat
tgtgaagccagaggaaaccctgttccgacctacagttggctgatcaatggaacgaatgtg
gacacagaagcagatttccgctacagtttgattgatggaaatttaataatacacaatgca
agcgaagtcatcgattatggaagataccagtgcagagctgaaaacagcattggcatcgtc
ttgagtcgagacgccctcctgcagtttgcctatctcggcccgttcagcggtaagactaga
ggagctgtttcggtgagggaaggccagggggttgtgctaatgtgtgcccccccttctcat
tctccagagatcatttacagctgggtgttcaatgagctcccctcattcgtggcagaggac
agccggcgattcatctcgcaggaaacgggaaatctgtatatccccaaggtgcagccctca
gacgtgggcagctacgtgtgccaagtgaagaacactgtgaccaacgctagggtcctgagc
ccgccgacgcccctgactctcaaaacagatggagtaatgggggagtacgagcctaaaatc
gaagcacattttccccagacggtactggcagccaaaggcgtcaccgtgaggctggagtgc
tttgcccttgggaatcctgtccccacaatcacctggaggaagatgagtggaaacattccc
aaaaaagcccgtcttcgcaaatcacaggctgttctcgagatccccaacatccagctagag
gattctgggagttacgagtgtaaagctgagaacaccagaggaggcaccgctttcagagga
cacctgcaggtctacactctgccgcagtggatcagcatgataaatgacactcaactggac
agcggagagcagctccgttgggagtgtcgagccacaggaaagcccagacctacatatcgc
tggctgcgcaatggagaaccactcagcacacagagcagagtggaaatggtgaatggagag
cttaccattcacagactccagcaggctgattcggggatgtaccagtgcatcgcagagaac
aagtatggagccatctattccagcgcagagctcaaaatactggcatcagctcccatgttc
aacaacaacccagtccgtctcatcgcaaccgttgggaaagacgtgtctctagagtgccgt
cctcgtgcttcacccaaacccagaatctcatggaggaaaaacgaccgaagacttcaaccc
agccgaaggatcatgttacttcggaacaacaccttgcgcatcattaactccagtcgctcg
gatgagggaagctacgtgtgccgtgcagaaaaccagtttggatcagcagagctgaccact
gtgcttctggtgaaagagcccatgcgggtggagttgagccccctgcgggtggaggtgacg
gtgggagagagtgtggtgctcagctgtaaagtcactcatgacccttcgctggacgtgtcc
ttcctctggctgctgaacaaccaaccgctcaacacacagcaggatggaggacactttgag
tacatccaaacacagtcctccaccgcagacctgatgatcaggagcatcctcctgaagcat
gctgggaaatatggctgtcgagctcagaccagcactgacagtgtgcttgctgaagctgag
ctgctggtgcgagggcctcctggacctcctggagtggtgattgtagaggagatcacggcc
agcaccgccacactgtcatggagccacggtgtcgacaaccacagtccaatcaccacatac
aatgtacaagcacgcagccctgtctctctgggatggcagacagtgaaaaccgatccagac
ccggtgacaggaagcatggagtcagccatggcagtggatctcaacccctgggtggagtat
gagtttcgggtggtggccacaaacagcataggcacaggcgacccgagccccccatccaga
gcggtgcgcactaaagaagcagtaccatctgtagcccctgccaacgttcgaggagggaac
ggccgcaggcatgagctggtcatatcctgggagccagtctcagaggagtaccaaaacgga
gaaggctttggctacatcgtggcgtttcgggtcaacggcacacgtggatggaaagagaag
atggtgacgtctgcagattccaccacgtacaaatacagagatgagacattcccccctctg
accccgtttgaggtgcgggttggggtttataacaacaaaggcgacgggcccttcagtgaa
gtggtcactgtgttctctgcggagggagagcccagagagccaccttcagaagtgcaggca
ttcgcagtctcttcctcggaaattaaagtcttgtggaagccgcccagtcctggacttgga
agaccccaaggatatgaggtgagcttctggaaggatgtggagcaggaggagttggggaag
aagaagaggacgttggggaatgagacgaacatgttgttgtcagggctggatggaaacacg
caatatctggtgtctgtgaaaggattcaacagcgccggtcaagggccatctagcacagcc
gtcaagatcagcacaaagaaaaatgccccaagtctacctccaggcaacttgatgtggatt
caagaggggaacaatgtttctctatcttgggatccagtgaaagcaagggacaatgagtca
gaagtcattgggtacaaggtattattgcgtcaagagggacgtggccacagccaagtcatg
aggactccaaattcagcagtggtcctgacgcttcctgaagggggaacatacatcattgaa
gtgcgcgcagtcagtgaaggaggtgaaggagccgccagcgctcaggtcagagtgctcacc
tcctcaggcgtgcgtgcaaagaatgggcagctctctgtccagaattcacctccaggcttg
gcatggactgctcttttcctgtcattaatggtgccttcttttcccttgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (12)   
   Pfam (12)   
All databases (53)   

Download RDF
DBGET integrated database retrieval system