KEGG   Danio rerio (zebrafish): 334113
Entry
334113            CDS       T01004                                 
Symbol
bcan
Name
(RefSeq) brevican core protein precursor
  KO
K06795  brevican
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:dre00535]
    334113 (bcan)
   00536 Glycosaminoglycan binding proteins [BR:dre00536]
    334113 (bcan)
   04091 Lectins [BR:dre04091]
    334113 (bcan)
Proteoglycans [BR:dre00535]
 Extracellular matrix (ECM) proteoglycans
  Aggrecan / versican family
   334113 (bcan)
Glycosaminoglycan binding proteins [BR:dre00536]
 Hyaluronan
  Extracellular matrix or blood plasma proteins
   334113 (bcan)
Lectins [BR:dre04091]
 C-Type lectins
  Group 1: Proteoglycan core proteins
   334113 (bcan)
SSDB
Motif
Pfam: Xlink Lectin_C V-set Sushi EGF hEGF ig EGF_2
Other DBs
NCBI-GeneID: 334113
NCBI-ProteinID: NP_001077282
ZFIN: ZDB-GENE-030131-6045
Ensembl: ENSDARG00000099412
UniProt: A4JYN2
Position
16:complement(29310173..29368959)
AA seq 1295 aa
MFLHILLSAICLCVLSSSSVLSSATDDSSALKVAIPASSPVSAVLGGSLTLPCLVSLPRT
PSLGRHAVLTQPRVKWSFLSSDRETEILVARGERVKVSEAYKGRASLLNYATSSADLTLR
LEGLIHNDTGFYRCEVQHGLEDSHDQAQVKVKGVVFLYRHTSSRYAFTFDEARDACKDIG
AEIASPEQLLAAYHSGYEQCDAGWLSDRSVRYPIQMPREGCFGDMDGLPGVRNYGTMEND
ELYDVYCYVENIHGEVFHGSTPQRFSLSEAKAYCEQQDAQLATTGQLYAAWNDGLNHCSP
GWLADGSVRYPIVTPRERCGGSEPGVKTVYRFSNQTGFPEPNTRHDAYCFKANSNSQTAP
PADYMATSPEETEQHIVTLAEPQEEYSVHQVTQRSENEAQGAVESFSIYSTQTASETEEH
NHTSSPQEDIIIGSRKDLTTPTSTEGNTETIEVTWQNVESIPEIYIDPKRNNFMLEGEPE
IKASAVDGVKSSNHRHYQPMPDTNLEPGEPIDFIPPTVAHHGTTEEPSSPPKEINGSKHY
QPMPDTNLDDEDHMTTQSTTLQYDSSNNTTQDASVQSTYHPDGATLETNAGNITEAPESD
DNQGLFTHTTQPTSTSTSSREGWLESSGEDSTTEKAIYLDLTTKEAVNLDSTTEEPIHLD
STTEEAIHLDSTTEEAIHLDSTTEEAIHLDSTTEEAMFSTHNSEIYRASTAETLTESYSS
THLNNISPTDDVTDHFTLSTTLRETELSESSGDHDEVLPVILFTTPMPHLLDSLTTRAPV
QLEISSPQQIEGVLSDSTTASALRVVEEEVEKVEQEELGEQPETKITTSTELNHSTVTLS
IDGSDEEESSGEPSENWTSVTENPYSNTATITPSNLTDLQEHNETNSDDEDNQAITVEPT
TDLEVTFLPHGTQTSIWQSVVTSPGELNADVEFSGEAALTTDDMRALEESESTNAPISEQ
TEETLKPSSTTDHNDADDDDNDNDDDELITKAITGNEEDENDVKTTHESFIIPVRPTQRV
LIRTSYISDACLENPCKNGGTCVDSGGDQRCLCLPTYGGDFCETDLEHCEPGWEKFQGFC
YKHFAKRQKWEVAEQHCRMCGGHLVSVMSPEEQLFINDKYREYQWTGLNDKTIEGDFRWS
DGNPLLYQNWYRGQPDSYFLSGEDCVVMVWYDDGRWSDIPCNYQLSYTCKKGISAFCGQP
PLVLHAKMFGRRQLKYRANSQVRYYCESGFIQRQNPIITCQSNGLWEEPKIMCSPAGPTY
SNGDLVTWRTGQNKEIVIEDSTTKTPEYLDIKWNF
NT seq 3888 nt   +upstreamnt  +downstreamnt
atgttcctgcatatactgctgagcgccatctgcctctgtgtcctgtcatcctcctctgtc
ctcagttctgccacagatgattcttcagccttaaaagtggccattcctgccagctcacca
gtgtctgctgttttgggtggctctttgacgctgccctgcctggtgagtcttccccgtacg
ccatctttgggtcgacatgcagtattgacgcagccacgggtcaaatggagctttctttca
tcagacagagagacagagattctggtggcccgtggtgagcgggttaaggtgagtgaggct
tataaaggcagagcgtcgctgctcaattacgctacctcttcagctgatctcaccctcaga
ctggagggattgattcacaacgacacaggtttctaccggtgcgaggtccagcatggcctg
gaggactcacatgaccaggctcaagtcaaagttaagggggttgtcttcctctaccgccat
acctcgagtcgctatgccttcacttttgatgaggccagagatgcgtgtaaggacatcgga
gctgagattgcttctccagagcagctgctggctgcctatcacagcggttatgagcagtgt
gatgctggctggctttcagatcgctccgtcagatacccgatccagatgcctcgggaaggg
tgttttggagatatggatggattaccaggcgttcgtaactacggcacgatggagaacgat
gaactctatgacgtatattgctatgtggagaacattcatggggaggtttttcatggctca
accccgcagcgcttcagcttgtcagaggcaaaggcgtactgtgagcagcaggacgctcag
ctcgctaccacaggtcagctgtacgctgcctggaatgatggtctgaaccactgcagtcct
ggctggctcgctgacggaagcgttcgctaccccatcgtgaccccccgtgaacgctgtggg
ggctctgaacctggcgtcaagaccgtctatcggtttagcaatcaaacaggattccctgaa
ccaaacactcgccatgatgcttactgcttcaaagctaacagcaactctcaaacagcccca
cctgcagattatatggcaacatcgccagaggaaacagagcagcatatcgtaactttagca
gaaccccaagaggaatacagtgtgcatcaggtcactcagcgatctgaaaatgaagctcag
ggagctgttgagtccttttcaatttacagcactcaaactgcttcagaaactgaggaacac
aaccatacctcaagccctcaagaagacatcattattggctccagaaaagacctcactact
ccaaccagcacagagggaaatactgagaccattgaggtcacctggcaaaatgttgagtcc
attcctgaaatttacatagatccaaaacgcaataatttcatgctagagggagaacctgaa
ataaaagcttcagctgtcgatggtgtgaaaagcagcaatcatagacactaccaaccaatg
ccagatactaatctagagccaggggagcctatcgacttcatcccacctacagtggctcat
catggaacaacagaggaaccgtcctctccaccaaaggaaatcaatgggtccaaacactac
caacccatgcctgacaccaacctggatgatgaagatcatatgacaactcagagcactaca
ctgcaatatgactcaagcaataacacaactcaagatgcttcagtccagtcgacgtatcac
cctgatggtgcaacattagagacaaatgcaggaaatatcactgaggctccagagtcagat
gacaaccagggtctttttacacacacaactcagcccacctcaacgagcacatccagcagg
gaaggttggttggagagttctggtgaagattcaaccacagaaaaagcaatatatctggat
ttgaccacaaaagaagcagtaaatctggattcgaccacagaagaaccaatacacctggat
tcaaccacagaagaagcaatacacctggattcaaccacagaagaagcaatacacctggat
tcaaccacagaagaagcaatacacctggattcaaccacagaagaagcaatgtttagcaca
cataattcagaaatatatagagcatctacagctgagactttgacagaaagctactcatca
acacatctgaacaatattagcccaactgatgatgttactgatcatttcactttgagcaca
acactgagggaaactgaactgtctgaaagctctggagatcatgatgaggtcctgcctgtc
atactcttcaccacacctatgcctcatctgctggactccttaaccacacgtgcacctgta
cagctggaaatcagttctccacagcaaattgaaggagttctctctgacagcaccactgca
tctgccctcagagttgtggaagaagaagtggaaaaggtggagcaagaagagcttggggaa
caacctgaaaccaaaatcaccacatccactgagcttaatcattctactgtaactctgagc
attgatggcagtgatgaagaggaatcttcaggagaaccttcagaaaactggacctcggta
actgaaaacccttactcgaacacagccaccatcactccttctaatctaacagatctgcaa
gagcacaacgaaaccaatagcgatgatgaagataatcaggccatcactgtggaacccaca
acggatctggaggttacttttcttcctcatgggactcagacctccatctggcagagcgtg
gtgacaagccctggagagttgaacgcagatgttgagttcagtggagaagcagcactgacc
acagatgacatgagagcattagaggaatctgaatccaccaatgcacctatcagtgagcag
actgaggaaactctaaaaccatccagcacgacagaccataatgatgctgacgatgatgat
aatgataatgatgatgatgaactcataactaaagcaataacaggcaatgaagaagatgag
aatgatgtcaaaaccacacacgagtccttcattatacctgtcagacctacacagagagtg
ttgatcaggacaagctacatttcagacgcatgtttggaaaacccttgcaaaaatggaggc
acctgtgtggacagtggaggagatcaaaggtgtctctgtttgcctacctatggaggagac
ttctgcgagacagatctagagcattgtgaaccaggctgggagaagttccaggggttttgc
tacaagcatttcgccaagcgtcagaaatgggaagtggcagagcagcactgtcgcatgtgc
ggaggtcacctggtttctgttatgtcacctgaggaacagttgttcatcaatgataaatac
agggagtatcagtggacgggcctcaacgacaaaacaattgagggagatttccgttggtca
gatggaaaccctctgctctatcaaaactggtatcggggtcaaccagacagctacttccta
tcaggagaggactgtgttgttatggtgtggtatgacgatggccgctggagtgatatcccc
tgtaactaccagctttcctacacctgcaaaaagggcatttcagcattctgtggccagccc
cctcttgtgctgcatgctaagatgtttggacgccgtcagttaaagtacagggcgaattca
caggtgcgctactactgtgagtcaggcttcattcagagacagaaccctatcatcacctgt
cagagcaatggactatgggaggaacccaaaatcatgtgttcaccagcgggaccaacatat
tcaaatggagacctggtaacatggcgcacaggtcagaacaaggaaatagtcatagaagac
tcaacaacaaaaacacctgaatatttggatataaaatggaacttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (52)   

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