KEGG   Danio rerio (zebrafish): 335453
Entry
335453            CDS       T01004                                 
Symbol
grnb
Name
(RefSeq) granulin b precursor
  KO
K23879  progranulin
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    335453 (grnb)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Others
   Others
    335453 (grnb)
SSDB
Motif
Pfam: Granulin Prenyltrans
Other DBs
NCBI-GeneID: 335453
NCBI-ProteinID: NP_997903
ZFIN: ZDB-GENE-030131-7393
Ensembl: ENSDARG00000025081
UniProt: Q7T3M4
Position
24:36339224..36364786
AA seq 729 aa
MVRAAFIALLCVCVNACTALICPDGGMCEDENTCCLTPSGGYGCCPLPHAECCSDHLHCC
YQGTLCDLEHSKCVNKTHVLDWVEKVEAKLQAVVCPDGESECPDDTTCCQMPDGGWGCCP
MKNAVCCDDRKHCCPQGTTCDLVHSMCVSATYGSSPFLRKFAARRRKPLEKNAVDLPAEV
NNIREVICPDKISKCPEDTTCCLLETGSYGCCPMPKAVCCSDQKHCCPEGTTCDLIHSTC
LSANGVSEMAIKIPAVTVLKPKEEVVPCNETVACSSGTTCCKTPEGSWACCPLPKAVCCE
DHIHCCPEGTLCNVAASSCDDPTELSVSVPWMEKVSTKPIAPPPNKKCDESSSCPGESTC
CKLSSGDWGCCPLPEAVCCEDHVHCCPHGSVCNVAAETCETVSDSALRISVPMVKKIPAV
SVPSQKQNCDETSSCPTGTTCCKLTSGSWACCPVPQAVCCADQEHCCPQGYTCDLAQSSC
VRSGLPSMAWFRKEPALRETQRVEDRHMCDAHTSCPRDDTCCFINRIGKWGCCPLPKAVC
CKDGDHCCPSGYTCNEEKTSCTKGLHQIPWFTKKTARVWKSSDELLGHEDVKCDSSTSCP
SGSTCCILPTGQWGCCPLVKAVCCEDHEHCCPQGYICKLELGTCEKASADLSVSLTAVQM
PEIQCDTFTRCAHTQSCCRLADSTWACCPYTQAVCCKDMKHCCPMGYKCDPKVQGCTKSS
SSTWWNNSL
NT seq 2190 nt   +upstreamnt  +downstreamnt
atggtgcgtgcagctttcatagccttattatgcgtgtgtgtgaacgcatgcactgctctg
atctgtccggatggagggatgtgtgaagatgaaaacacctgctgtctaacgccgtcagga
ggatacggctgctgcccacttccccatgctgaatgctgctccgatcacttgcactgctgt
tatcagggaactttgtgcgacctggaacattccaagtgtgtgaataagacgcatgtttta
gactgggtggaaaaagtcgaggccaaactgcaagcggtagtttgtccggatggagagtct
gaatgccctgatgataccacctgctgccagatgcctgatgggggctggggctgctgtcct
atgaaaaatgccgtgtgctgtgatgataggaaacactgctgtcctcaaggaaccacatgt
gaccttgtgcattcaatgtgtgtgtcggccacgtatggctcgtcccctttcttaaggaaa
tttgctgctcgtcgcaggaagccattagagaaaaacgcagtcgatctgccggcagaggtc
aacaatattagagaagtgatctgtccagataagatttccaaatgtccagaagatacaaca
tgctgtttactagagaccggtagttacggatgctgtccaatgccaaaggctgtgtgttgt
tctgatcaaaagcactgctgtccagagggcacgacctgtgacctcatccatagtacgtgt
ttgtcagcaaatggagtctcagaaatggccattaagatcccagctgtcactgttctgaaa
cccaaagaagaagtagttccctgtaatgaaaccgtggcgtgttctagtggcaccacctgc
tgtaaaacgccagaaggctcctgggcttgctgtcctttaccaaaggcagtgtgttgtgag
gatcacattcactgttgtccagaaggaacgttgtgtaatgttgcggccagctcctgtgat
gaccccacagagctttctgtgtctgtgccctggatggagaaggtgtccaccaaacccatc
gctcctcctcctaataagaaatgtgacgaaagctcatcgtgtcctggagaatccacctgc
tgcaaactctcatctggagactggggctgctgcccactgcctgaggcagtgtgttgtgag
gaccatgtccactgttgtccccatggctcagtgtgtaatgtggctgctgaaacctgtgaa
actgtcagtgattcggctcttcgtatttctgtgccaatggtgaagaagatccctgcagtg
tctgtgccatcacagaaacaaaactgtgatgaaacgtcttcgtgtccaaccgggaccacc
tgctgtaaactgacctccggctcctgggcctgctgtccagtgccacaggccgtgtgctgt
gcggatcaggagcactgctgtccacagggatacacgtgtgatttggctcagagtagctgt
gtgcgttctggccttcctagcatggcatggttcaggaaggagcctgcgctgagagaaacc
cagcgggtagaggacagacacatgtgtgacgctcacaccagctgccccagagacgacacc
tgctgcttcatcaaccgcatcggcaagtggggctgctgtccactgccaaaggcggtgtgc
tgtaaggatggagatcactgctgtccaagcggctacacctgtaacgaggagaaaacctcc
tgcaccaaaggcctacatcagatcccttggttcacgaaaaaaacggcaagagtctggaag
agttcagacgagctgctcggacatgaagatgtgaagtgtgactccagcaccagctgcccg
tctggctccacctgctgtattttacccacaggacagtggggatgctgccctctagtcaag
gccgtgtgctgtgaggatcatgagcactgctgtccacagggctacatctgtaagctggag
ttagggacgtgtgagaaagcgtctgcggatctcagtgtttctctgactgcagttcagatg
ccagagattcagtgcgacaccttcactcgctgcgcacacacgcagagctgctgcagatta
gcagactccacgtgggcctgctgtccttatacacaggctgtgtgctgtaaagacatgaag
cactgctgcccaatgggatacaaatgtgacccaaaagtccaaggttgcactaaatcatcc
tcatccacgtggtggaataattctctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (147)   
   KEGG ORTHOLOGY (1)   
   RefGene (141)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (163)   

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