KEGG   Danio rerio (zebrafish): 335459
Entry
335459            CDS       T01004                                 
Symbol
fbxo42
Name
(RefSeq) F-box only protein 42
  KO
K10317  F-box protein 42
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    335459 (fbxo42)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     335459 (fbxo42)
SSDB
Motif
Pfam: Kelch_3 Kelch_4 Kelch_5 Kelch_1 Kelch_6 Kelch_2 F-box-like F-box F-box_5
Other DBs
NCBI-GeneID: 335459
NCBI-ProteinID: NP_997904
ZFIN: ZDB-GENE-030131-7399
UniProt: Q7T302
Position
22:complement(191635..225386)
AA seq 619 aa
MELEEGGAELKAEHSMAELPEEVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAHQCYH
GFLRAIQEGNIQWESRTYPYPGTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDL
WRLDLNSKEWIRPLASGSYPSPKAGATLVMYGDLLVLFGGWTRPSPYPLHQPERFFDEIH
TYSPSKNWWNCIVTTHGPPPMAGHSSSVIRSTMVVFGGSLGARQMSNEVWVLDLEQWTWS
KPTISGPSPHPRGGQSQIVMDEETLLILGGCGGPNALLKDAWLLHMSDPCWTWQQLRVEN
EDHGAPELWCHPACKVGQCVVVFSQAPSGRAPLSPSLNSRPSPISSTPAPLGPDPPSLRS
QSPVRSGAAGAVLGAVEEAPCVNGRWGTLRPRASARASSSSSPSRGPDSPPLLNGASPSP
RTSPVQQASPPARPPGPADLSWDGSPPSANGLHTPPGSPRTPPGAVSPAALRRGLEAVKA
SSSLPSPPPAPQPGPSAPSGTPPAPPSPPPIARRLGHHPPQSLNVGKPLYQALSCKPMQM
YLLDVSRARTQGVVAWRVYGSGGAPSAVTGPPETSLHTVVQGRGELIIFGGLMDKKQNVK
YYPKTNTSMCVCVRVRVRV
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggagctggaggagggcggagctgagctgaaggcggagcacagtatggccgagctgccg
gaggaggtgctggagtacatcttgtccttcctgtcgccctatcaggagcacaagacggcc
gccctggtctgcaaacagtggtaccgcctcatcaaaggtgtggcacatcagtgttaccat
ggtttcctgcgggccattcaggagggaaatatccagtgggagagtcgcacgtacccgtat
cctggaaccccgatcacacaacgcttctctcacagtgcgtgttattacgactctaatcag
tcgatgtacgtgttcggcggctgcactcagagcagctgtaacgcggcgttcaatgacctg
tggcgtctggacctcaacagtaaagagtggatccgcccgctggcctcaggctcgtacccg
tctcctaaagcgggcgccacactggtgatgtacggggatctgctggttctgttcggcggc
tggacgaggcccagtccgtacccgctgcaccagcccgagcgcttcttcgatgagattcac
acatactcaccctccaagaactggtggaactgtattgtgacgactcatgggccgccgccg
atggccggacactcgtcctctgtgatccgcagcacgatggtggtgttcggcggctcactg
ggggcacggcagatgagtaatgaggtgtgggttctggatctggagcagtggacctggtct
aaaccaaccatcagcggcccgtcacctcacccacgcggaggacagtctcagatcgtgatg
gatgaggagacgctgctgattctgggtggctgtggaggaccgaacgcgctgctgaaggac
gcctggctcctgcacatgagcgacccctgctggacgtggcagcagctgcgggtggagaac
gaggatcatggagcgccggagctctggtgtcatccggcctgcaaggtgggccagtgtgtg
gtggtgttctcccaggctccatctggtcgggcccctctgagccccagtctgaactctcgg
ccgtcccccatcagctccacccctgctcctctgggccctgacccaccatccctgcggtcc
cagtctccggtgcgcagcggggcggcgggggcagtgctgggggcagtggaggaggccccg
tgtgtgaacgggcgctggggaactctgcggccccgagcgtcagcacgagcgtcctcgtcc
tcatctccctcacggggccctgatagccctcctctcctcaacggggcctcgccgtccccg
cgcaccagccctgtgcagcaggcctcgcctcccgcccggcccccgggccctgcagatctc
agctgggacggctctccgccgagtgccaatggtctgcacacaccaccgggttccccgcgg
acgcccccaggagccgtgtctccagcagcgctgcgcaggggtttggaagccgtcaaagcc
tcatcctctctgccgtccccgccgcccgcaccgcaaccaggcccctcagcccccagcggg
acccctccagcccctcccagccccccacccatcgcccgccgcctcgggcaccacccgccg
cagagcctgaacgtgggcaagccgctgtaccaggcgctgagctgtaagcccatgcagatg
tacctgctggacgtgtcgcgggcgcggacgcagggtgtggtggcgtggcgggtgtacggc
agcggcggagctcccagcgccgtcaccgggccccccgagaccagcctgcacaccgtggtc
cagggccgcggggagctcatcatcttcggcggactcatggacaaaaagcagaacgtcaaa
tactaccccaaaaccaacactagcatgtgtgtgtgtgtgcgagtgcgagtgcgagtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (74)   
   KEGG ORTHOLOGY (1)   
   RefGene (69)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (91)   

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