KEGG   Danio rerio (zebrafish): 336679
Entry
336679            CDS       T01004                                 
Symbol
csde1
Name
(RefSeq) cold shock domain-containing protein E1
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: CSD SUZ-C S1-like CusF_Ec
Other DBs
NCBI-GeneID: 336679
NCBI-ProteinID: NP_001186365
ZFIN: ZDB-GENE-030131-8623
Ensembl: ENSDARG00000074758
UniProt: E9QFH8
Position
8:complement(22521729..22542545)
AA seq 798 aa
MSFDPSLLHNNGHSGFANGTSMGIRETGVVEKLLTSYGFIQCSERQARLFFHCSQYNGNL
QELKIGDDVEFEVSSDRRTGKPIAVKLVKIKAEMLPEERISGQVVSAIPSHLDGKSAPGQ
LPTGSVCYERNGEVFYLTYTLEDVEGNVSLDIGDKVSFYMETNKHTGAVSAHNIVLVQKK
ESRCQGVVCATKEAFGFIERGDVVKEIFFHYSEFKGDLEALQAGDDVEFTIKERNGKEVA
TDVRLLPQGTVIFEDISIETFEGTVSKVIPKVPTKNQNDPLPGRISARINFTDKELLFGE
KDTKSKVTLLEGDHVQFNISTDRRDKLERATNIDILPDTFHFTKETREMGVIAAMRDGFG
FIKCVDRDARMFFHFSEVLEESQLHISDEVEFTVVPDMLSAQRNHAVRIKKLPKGTVSFH
TQSELRFMGVVEKEAIPAITIKNSSPSKGKEKDAEEGLIAYEDVGVKTTLPYHIKDLEGG
VYPQLGDKVEFSISEVKRTGQQSAVSFKILNRAVGSKRLLGYIATLKDNFGFIETANHDQ
EIFFHYSEVCGDVDSFDLGDTVEYTLSKGKGNKISAEKVTKIAAVNGVGEDVSTTVSLGK
VVRPLRSVDPSQTEYQGLIEITEDGSNKGQSYPFGIVGMANKGDCLQKGELVKFQLCTVA
QTGQKMACNIMPQRRALVECVKDQFGFITYEVGESKKLFFHVKEVQDSLELQAGDEVEFS
VILNQRTGKCSACNVRRVSEGPKPVATPRPDRLVNRLKSITLDDSNAPRLVIIRQPRGPD
NSKGFSVERKSRQPGVID
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgagttttgaccccagtctgctgcataataatggccatagtggctttgccaatggaact
agtatgggaattcgtgagactggagtagttgaaaaactgctcacatcttatggcttcatt
caatgctctgagagacaggcccgtctcttcttccactgctctcaatataacggcaacctg
caggagcttaaaattggagatgatgtggagttcgaggtgtcgtctgataggcgcactggc
aaaccaattgcagtgaagctggtaaaaatcaaggcagaaatgttgccagaagagcgaatt
tctgggcaggtagtgtcagctatcccttctcatctggatgggaagtctgcacctggccaa
ttgcccacaggcagtgtgtgttatgagaggaacggggaagtgttttatttgacctacacc
ctagaagatgtggaaggaaacgtttctttagatattggtgataaagttagtttttacatg
gagaccaacaagcatactggtgctgttagtgcccacaacattgttttggtgcagaaaaaa
gagtcaagatgtcagggagtggtttgtgctaccaaggaggcctttggattcattgagcga
ggggatgttgtgaaggaaatctttttccactacagtgagtttaaaggagacctggaggct
ttacaagctggagacgatgtggaattcaccattaaagaaagaaacggaaaggaagtggcc
acagatgtgagactgttgcctcaaggcactgttatatttgaggacattagcattgagacc
ttcgagggcactgtcagtaaggttattcccaaggtccccacaaagaatcagaacgaccct
cttcctgggagaatcagtgccagaatcaattttactgacaaagagctgctatttggggag
aaggacaccaagtccaaagtgacgctgcttgagggcgatcatgtccagttcaatatatcc
actgaccgtcgcgacaaactggagagagcgacaaatattgacatcctccctgacaccttc
catttcacaaaggagacccgtgaaatgggtgtgatagctgccatgcgtgatggttttggc
ttcatcaaatgtgtggaccgtgatgcccggatgttcttccatttcagcgaagttttggaa
gagagccaactgcacatttctgatgaagtggaattcactgttgtccctgacatgctgtca
gcccaaaggaaccatgctgtgcggatcaaaaagctgcccaagggcacagtgtctttccac
actcaatctgagctgcgttttatgggagtggtggagaaagaagccatacctgccatcacc
atcaagaactccagccccagcaagggcaaagagaaggatgctgaggaaggcttgattgca
tatgaagatgttggagtaaagaccacccttccctaccatattaaagaccttgaaggtggt
gtttatccacagcttggagacaaggtggagttctccatcagtgaagtaaaacgcactgga
cagcaaagtgctgtgtccttcaagattcttaaccgcgcagttggctccaagaggctgctg
ggatacatagcaactctaaaggataactttggcttcatagaaacagccaatcacgatcag
gagatcttcttccactacagtgaggtttgtggggatgtggatagctttgatcttggagat
acggtggagtacactctctccaagggcaaaggaaacaaaatcagtgcagagaaggtcacc
aaaattgccgctgtgaatggagttggagaggatgtgagcactacagtgtccctgggaaag
gtggttcggccgctgcgcagtgtggacccgtctcagactgaatatcaaggccttattgag
atcacggaggatgggtccaataagggacagagttatcctttcggcattgttggtatggcc
aataaaggtgactgtttacaaaagggcgagttggtgaagtttcagttgtgtacggtggca
cagacaggacaaaagatggcctgcaacatcatgcctcagcgcagagccctggtggagtgt
gttaaagatcagtttggtttcatcacgtatgaagttggagaaagcaagaagttgtttttc
cacgtcaaggaggtgcaggacagtctggagctgcaggctggtgatgaagtggagttttcg
gttatcttgaaccagcgtacgggcaaatgtagtgcctgtaatgttcgcagagtcagtgag
ggtccaaaaccagtagcaacacctcggcctgacagacttgtcaatcgcttgaagagcatc
actctggatgactccaacgctcctcgtctcgtcatcattagacagcctcgtggccctgat
aattcaaagggctttagtgtagagagaaaatcccgccagcctggtgttattgactga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (22)   
   RefSeq(nuc) (12)   
   GenBank (5)   
   EMBL (5)   
Protein domain (4)   
   Pfam (4)   
All databases (53)   

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