KEGG   Danio rerio (zebrafish): 368509
Entry
368509            CDS       T01004                                 
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
  KO
K09273  upstream-binding transcription factor
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    368509 (ubtf)
   03021 Transcription machinery [BR:dre03021]
    368509 (ubtf)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   UBF
    368509 (ubtf)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    UBF
     368509 (ubtf)
SSDB
Motif
Pfam: HMG_box HMG_box_5 HMG_box_2
Other DBs
NCBI-GeneID: 368509
NCBI-ProteinID: NP_001005395
ZFIN: ZDB-GENE-030616-252
Ensembl: ENSDARG00000035066
UniProt: F1QZ83
Position
3:complement(20041906..20064884)
AA seq 735 aa
MNGEMDSSAKATVWVQDDVLKLLDAMKVNLPEKDLAKYKTSESHLDWEKVAFDAYSAEVC
KQKWQEVSREIRKFRTLTELIVDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFLREKETFMLSMMKFKQEHPDLLE
NVNKKSNVPEKAKTPQQLWYSHEKKAFLKAHPDATTKDIKDNLGKQWPQLSDKKRIKWIA
KSLEQHKLYEEKMREFIQQHPEMNMTQGDIVKSSLTKAERQLKDKFDGRPDKPPSNGYSL
FCAELMSSMKDVPSTERMVMCSQRWKLLKQAEKDAYQKRCEQKKKEYEVEMNRYLLSISE
EEQQRILSEQKMGSFKKAGGISSPASKKKSSKAKPSAEKPKPPISAMFIFSEEKRPKLKQ
EKPELSDMELTRLLARMWNELTDKKKEKYKTLEMALKAEAEKQSREEKGKLPETPKTAQE
IWQQSVIGDYLARFKNDRAKAQKTMEATWNTMEKKEKIVWIKKAAEDQKRYERELSEMRS
PAPVITPGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRLPQK
DKDRYKRIAEEKQRLYKVELEQWLTSISSQERAAYKEYNSLKRRSTAKPGGTNAKVKPKA
KRSDDEEDEDEDDDDEDDDKDSDGSSSDDSDDDDDDDDEDNEEDVEDEEVDDKENKSESS
SSSSSSDDSSASDSD
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgaatggagaaatggactcctctgctaaagccactgtttgggtgcaggatgatgtgttg
aagttgttggatgccatgaaagtgaatctgccagaaaaagatctggccaaatacaagaca
tccgagtcccatttggattgggagaaagtggcttttgatgcttactctgcagaagtgtgc
aaacagaaatggcaagaagtttcccgtgagatacgcaagttccgcaccctcaccgagctg
atcgtggacgcacaggactacattaaaaatccatacaagggaaagaagctgaagaaacac
ccagacttccccaaaaagccattgacaccatattttcgtttcttcatggagaagcgtgcc
aagtatgctaagctacatccagagatgagcaacctggatctcacaaaaatcctgtccaaa
aaatacaaggagctcccagaccgtaaaaaagagaaatacgtgaaagattttctcagagaa
aaggagacttttatgctgagcatgatgaagttcaagcaggaacatcctgaccttttggag
aacgttaacaagaagtccaacgttccagagaaggccaagacaccccaacaactgtggtac
agccatgagaagaaggcttttcttaaagcacaccctgatgcgaccaccaaagacatcaag
gataatcttggcaagcagtggccacagctttcagataagaagaggatcaaatggatcgca
aagtctctggagcaacataaactatatgaggaaaagatgcgtgagtttatccagcagcat
ccagagatgaacatgacacagggagacatcgtcaaatccagtctgaccaaagcagaacgt
cagctcaaggacaagtttgatgggaggccagacaaaccaccttcaaacggttattctttg
ttctgtgctgagctgatgtccagtatgaaggacgttcccagtacggagcgtatggtcatg
tgcagccagcgctggaaactcctcaaacaggccgagaaagacgcataccaaaagcgatgt
gaacagaaaaagaaagaatatgaagttgagatgaaccgctacttgttaagtatctcagag
gaggaacagcagagaatactgtcagaacagaagatgggcagcttcaaaaaggccggcgga
atcagcagcccggcttcaaaaaagaaaagctctaaagcaaagcctagcgcagaaaagccc
aagccgcccatttctgcaatgttcatattctctgaggagaagcgtccaaaacttaagcag
gaaaaacctgagctttctgacatggagctcaccagactgctggcccgcatgtggaatgag
cttactgacaagaagaaggagaaatataaaaccctggagatggccctgaaggcagaggct
gaaaaacagagcagagaggagaaagggaagctaccagaaacgcccaaaacagctcaggaa
atctggcaacagagcgtcatcggagactatctggcccggtttaagaatgatcgggcgaaa
gctcagaaaaccatggaggccacctggaacaccatggagaagaaggagaagatcgtgtgg
atcaagaaagctgctgaggaccagaagagatatgaaagagagctgagtgaaatgcgatcc
cctgccccagtgataacccctgggaaaaagatgaaatttgacggcgaacctaagaaacca
ccctcgaatggttatcaaaagttctctcaggagatgctgtcgaatggcgaactcaaccat
ctgcccatgaaagagcgcatgggtgaaatcggaggccgctggcagagactccctcagaaa
gacaaggaccgctacaaacgcattgcagaggagaaacagaggctttacaaagtggagctt
gagcagtggctcacgagtatatcatcacaagagcgagctgcgtataaagaatacaattct
ctgaaacggaggagtacagcaaaaccaggtggcaccaatgctaaagtcaaacctaaggct
aaaagatcggacgatgaagaggatgaagatgaggacgatgacgatgaggatgatgataag
gactctgacggatcatcctctgatgacagtgatgatgacgatgatgacgacgatgaagat
aatgaagaagacgtagaggacgaagaggtggacgacaaggagaacaaatctgaaagcagc
agcagttcttccagctctgacgattcatccgcttcagactcggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (3)   
   Pfam (3)   
All databases (65)   

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