KEGG   Danio rerio (zebrafish): 378993
Entry
378993            CDS       T01004                                 
Symbol
satb1a
Name
(RefSeq) DNA-binding protein SATB1a
  KO
K23225  DNA-binding protein SATB1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    378993 (satb1a)
   03036 Chromosome and associated proteins [BR:dre03036]
    378993 (satb1a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain CUT
    378993 (satb1a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    378993 (satb1a)
SSDB
Motif
Pfam: CUTL ULD CUT HTH_3
Other DBs
NCBI-GeneID: 378993
NCBI-ProteinID: NP_001073631
ZFIN: ZDB-GENE-031010-36
Ensembl: ENSDARG00000057649
UniProt: Q1LUN2
Position
19:complement(20453808..20482356)
AA seq 728 aa
MDHLATTSSTQGPALCEPSYPPCKMARMENCRDLPVPGVTPVSSKQTSHTNRRKGSLLPV
FCMVEQSDVPPSEGKRSEHAEFVLLKKDLLFSQITEAALQELGYTHTAAALATGQIQVGH
WNPVALSSVTDVSDATVGDMLQDLYHVITLRIKLHSVSKLEDLPAEQWTHSTVRNALKDL
LKEMNQSTLAKECPLSQSMISSVVNGTYYASISAARCQEFGQWYKHYKRTKAIMGDMSRQ
CTQPSSSSQPSMFQQPMEGSSAESRGVVQMQAGMPGLVMAQLLSQQHAMSQLLTHAHTHS
HIPHPAPLKTPPKCNVSPPTVTQCPSPVTDVSPEIYHWVREELKRAGVSQAVFARVAINR
TQGLLSEILRKEEDPRCASQSLLVNLRAMQSFLQLPQSQRDSIYVEERERNLNTAYNTNT
SSPLPIQAKLSPVSKDIVVKVECDDTGINYGIYEEIQQEMRRAKVSQALFAKVSAAKSQG
WLCELLRWKEEPSPQNRTLWENLSLIRQFLNLSQSERDIIYDQESNTGQTFYSEKHTRPL
TEQLQVIPQHMVALKQHQQLHKIPPQHHQLFLQHHLMAGSLKDTYMAPNFGGRSLPPEAH
AILQSFIQEVGLHPDQEAIHTLSAQLGVAKEAVLSFFSGHNWLRQEQDNRREIEIEDGED
DYMEAEDEFEENIEKTNASMMTGKQDLSADEQNAATQTRFIITIKQEEEFPCKEENGESP
AHCQFINS
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggaccatttggcgaccactagtagcacccaggggccggccctgtgtgaaccctcttat
cctccctgtaaaatggctcgtatggagaattgtagagatctgcctgtacctggagtcaca
cctgttagctccaaacagacatcacacactaacaggaggaaaggtagtttacttccagta
ttctgcatggtggaacaaagcgatgtcccaccatccgaagggaagcggtcggagcatgca
gaatttgtgctgctgaagaaagacctgctgttcagccagattacagaagctgcattgcaa
gagctgggatacacacacaccgcagcggctctggctacaggtcagattcaagttggccat
tggaaccctgtggctctgtccagcgtgacagatgtctctgatgcaacagtaggagacatg
cttcaagacctataccacgttatcaccttaagaataaagctgcacagtgtttctaaatta
gaggacttgcccgctgagcaatggactcattctacagtcagaaatgctctaaaggatctg
cttaaagagatgaatcagagcacattggctaaagagtgtccattatctcagagcatgatt
tcatcagtggtaaacggcacttactatgccagcatctctgctgcgagatgtcaagagttc
ggccagtggtacaaacactacaagaggacaaaagctataatgggtgacatgagcaggcag
tgcactcagccctcttcttccagtcagccctcgatgttccagcagccaatggaaggcagc
agtgcagagtcacggggtgttgtccagatgcaggctgggatgcctggtctagttatggct
cagcttctctcccagcaacacgccatgtctcagctcctcacacacgctcacacccactca
cacatacctcatcctgcacctctaaagactcctcccaaatgcaatgtgtcgcctccaaca
gtaactcaatgtccttctcctgtcaccgacgtgtcacctgaaatttaccactgggtgcgc
gaggagctgaagagggcaggcgtttcccaagctgtgtttgcacgagtggccattaacagg
acacagggtctgctgtctgagatcttgcgaaaggaagaggacccaagatgtgcatctcag
tctctattagtgaacctgagagccatgcagagcttcctgcagcttccacagagccagaga
gactctatctatgtggaggaacgagagagaaacctcaacactgcctacaacactaataca
agctcacctctgcccattcaggccaaactttctcctgtttccaaggatattgtagtgaaa
gtggaatgtgatgacactggaataaactacggcatttatgaagaaatacagcaagaaatg
aggcgagcaaaagtgtcacaggccttgtttgcaaaagtctctgcagccaagagtcagggc
tggctgtgtgagctgctacgctggaaggaggaaccatctcctcagaatcgtactttgtgg
gaaaacctgtctttgataaggcagtttctaaacctcagccaatcagagcgagatattata
tatgaccaggaaagcaatactgggcagaccttctactcagagaaacacacaagaccactg
actgaacagctgcaggtgattccacagcatatggtggctctaaagcagcaccaacaactg
cacaaaattccacctcaacaccatcagctcttcctccaacaccatctcatggccggaagt
cttaaagacacttacatggccccaaatttcggaggcaggtctttaccaccggaagcccat
gccatcctgcagagtttcattcaggaagttggactacatccagatcaggaggccattcac
acattatctgctcaactgggtgtagccaaagaggccgttctcagcttcttcagtggtcac
aattggcttagacaagagcaagacaacaggagagaaattgagattgaggatggagaagat
gattacatggaggcagaggatgaattcgaggaaaacatagagaagacaaatgcaagcatg
atgacagggaaacaagaccttagtgcagatgagcagaacgcagctacacaaactcggttt
atcattactattaaacaggaggaggagtttccatgcaaggaggagaatggtgaaagcccc
gcccactgccagttcataaactcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (37)   

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