KEGG   Danio rerio (zebrafish): 386806
Entry
386806            CDS       T01004                                 
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
  KO
K14407  cleavage stimulation factor subunit 2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    386806 (cstf2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    386806 (cstf2)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     386806 (cstf2)
    U7-dependent histone pre-mRNA processing factors
     386806 (cstf2)
SSDB
Motif
Pfam: CSTF2_hinge RRM_1 CSTF_C RRM_7 RRM_Rrp7
Other DBs
NCBI-GeneID: 386806
NCBI-ProteinID: NP_956408
ZFIN: ZDB-GENE-031118-2
Ensembl: ENSDARG00000090788
UniProt: Q6P0U7
Position
14:complement(41361858..41388180)
AA seq 488 aa
MANLAVAAAAAAAARDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRLVYDRE
TGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIE
SPYGDGCMPEEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYAL
LQAQVVMRIVDPEIALKMLHRPAVVPPINPSPQPGAVPAPNQPLPQPNVPVSQPQPMPGL
HVNGAPQMMQPPQMGGGVPGPMPGQGPMGPAGGMQPQIGIPPGGPVPMDRGPVPIVDPRA
PMRGAPQGLPGIPPRGLLGDGPNDPRGGSLVSVTGEVVEPGRGYIGGPPQHQGPPMHMAP
PDMRGPHDMRGGPMMGEPRGPMMEQRGPPIEARGRDPRAVDARGPIAGPRGPVAGGMQGP
PPHGMGPGAPPPARPGPGSDVSSQDHEKAALIMQVLQLTPEQIAMLPAEQRQSILILKEQ
IQKTAGAP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgaatttagcagttgccgcggctgcagctgctgctgccagagaccctgccgttgac
cgctcgttacggtcagttttcgtgggaaacatcccatatgaggccacagaggagcagctg
aaagacatcttctcagaggttggacttgtcgtcagttttaggctggtgtatgacagagaa
acagggaaaccgaaggggtatggcttttgtgagtaccaggatcaggagacggcacttagt
gccatgcgaaacctcaacgggcgagagttcagcggcagagcccttcgtgttgacaacgct
gccagtgagaagaacaaagaggagctcaaaagtttgggcactggagctccaatcatagag
tccccttatggagatggatgtatgccagaagaagccccagagtccatcagcagagcagtg
gccagcctgcctccagagcagatgtttgagctcatgaagcagatgaagctatgtgtgcag
aacagtcctcaggaggccaggaacatgctcctccagaaccctcagctggcttatgccctg
ctgcaggctcaggtggtcatgaggatcgtggaccctgaaattgctctgaaaatgctccac
cgtccggctgtggttccaccaataaacccaagtcctcaacctggagctgtgccggcacca
aaccagcctctccctcagcccaatgttcctgtgtctcagcctcagcccatgccaggttta
catgtgaacggagcccctcaaatgatgcagcctccacagatgggtggtggagtccccgga
ccaatgccaggacagggccccatgggaccagctggtgggatgcagcctcagattgggatt
cctccaggaggccctgtgcccatggatagaggaccagtgccgatagtagatcctcgtgcc
ccaatgcgaggggcccctcaaggtctccctgggatcccacccagaggccttcttggtgat
ggtccaaatgacccgcgaggtggatcattggtcagtgtcactggagaggtggtagaacca
ggccgtggttatattggcggcccaccacagcatcaggggccccccatgcacatggctcct
ccagacatgcgaggtcctcatgacatgagaggaggaccaatgatgggagaacccagaggg
ccaatgatggagcagcgtgggccacccattgaagcgcgaggtcgtgatccgagagctgtt
gatgctcgggggccgattgctggaccgagaggtcctgtggctggaggaatgcagggtcct
ccaccccacggcatgggaccgggcgcacctccaccggccagaccaggtcctggatcagac
gtgtcatcacaagatcatgagaaggctgccttgatcatgcaggtccttcagctgacccca
gaacagatcgccatgctgccagcggagcagagacagagcatcctgatcctgaaggagcag
atccagaagacggcaggcgcaccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (73)   

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