KEGG   Danio rerio (zebrafish): 393436
Entry
393436            CDS       T01004                                 
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
  KO
K12874  intron-binding protein aquarius
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    393436 (aqr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    393436 (aqr)
Spliceosome [BR:dre03041]
 Complex B
  Other components
   Prp19-related factors
    393436 (aqr)
 Complex C
    393436 (aqr)
SSDB
Motif
Pfam: Aquarius_N_1st Aquarius_N_2nd AAA_11 AAA_12 Aquarius_N_3rd AAA_19 ResIII AAA_30 DEAD UvrD_C_2 AAA_16 AAA SLFN-g3_helicase PhoH AAA_22 RNA_helicase
Other DBs
NCBI-GeneID: 393436
NCBI-ProteinID: NP_956758
ZFIN: ZDB-GENE-040426-1189
Ensembl: ENSDARG00000016775
UniProt: B1H1M2
Position
17:complement(51020024..51121771)
AA seq 1525 aa
MQKDSRLVKTSAPSVSQINAEFVTQLSNKYWAPHVKNKLPFDSKIIEEVYQNEILKSKFS
IRKIMLLEFSQYLENFLWPNYTPEASTNSYMMSICCIVNEKFRENVPAWEVFKKAPTHFP
HFFQRVMELCLSGEQFGLSLKEQTVLLLFLDHCFNSLEVDLIREQVQKLVSLPMWMCLLP
TRLQQELKTVPKLQKFWNLIKKNYEKMNTQDQEQAKKERTFLASLIKKFLAVLDSISASG
GVSMEKIHYCERFIEFMIDLEALLPTRRWFNTVLDDAHLMVKCQLSHLTGREKEGHLFCQ
LLDMLKFYTGFEISDQTGNALTQKEMTTLHYDRITSLQRAAFAHFPELNDFALSNVAAVD
TRESLNKHFGHLSPSTLHRVSAYLCLLPELPDGEETTYHKEFLLELLVSHHERRISQIEQ
LNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYE
IRQDIEDVVLRMKPWQSEYGGVVFGGWARMAQTIVSFSIVEVAKPNIGENWPARVRADVT
INLNIRDHIKNEWEGLRKHDVCFLITVRPNLPYGTRFDRRQPFVDQAGLVYVRGCEVQGM
LDDQGRVIEEGPDPKPKLRGDTRTYRVWLDSNQYQQDMTNSIQSGAEDPYETFNVIMRRK
PKENNFKAVLETIRNLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISSLDFNDTFLS
IQHLRSCFPEHTVKVTEEDPARQMPPFRIHFPVQSVKGKKRKADEEAAPCEEEQVLLVEP
HVTPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTNVAVQIISNLY
HNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYV
LSRRLELLQEVARLQESLDVPGDVSYTCETAGHFYLYQIMSRWEEYMSKVKPKPGREVPT
EDVATHFPFHKYFSNAPQPVFRGQSFQEDMDIAEGCYRHIRKIFTQLEEFRAFELLRSGL
DRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNP
EDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQGRARA
SLCNLYNWRYKQLGNLPHVQLQPEFRTPNPGFTFDFQLINVEDFNGVGESEPNPYFYQNL
AEAEYSVALYMYMRLLGYPAERISILTTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVD
RFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFQNCYELTPAFS
QLTARPLHLHIRPHEYYTSTEARSSQPDQVVKDMPEMANLVYNMYMHMMQSTQQYRQQQQ
RLLDPPRQVLKPQGKTAVMEQEEKDTTATTEEEKNTTVTTEEKKNTTAKTEEEKNTTAAK
EEKSTTGTEEEKMITTAAEEEQKNTKATEEEPMITTTTEEQQKISTATEEEPTIVTEEEE
QEHVKMPEHPGRDSDSGDSEEDEQE
NT seq 4578 nt   +upstreamnt  +downstreamnt
atgcagaaagactcaaggctggtgaaaacctctgcgccctcagtgtctcaaataaacgcg
gagtttgtcactcagctttcaaacaagtactgggctcctcatgtcaagaataaattaccg
tttgactctaagatcattgaagaggtttaccagaatgagatcctcaaatcaaaattttcc
atcagaaaaattatgcttctggagttcagtcaatatctggagaacttcctgtggccgaac
tacacgcctgaagcctccactaacagctacatgatgtccatctgctgcatcgtcaatgag
aagtttcgggaaaacgtccccgcttgggaggtgtttaagaaagctcccacacacttccct
cacttcttccagcgggtgatggagttgtgtttgtccggcgaacagttcggcctctcgctg
aaggagcaaacggtgcttctgctcttcctggaccactgcttcaacagcctggaagtggat
ttgatccgtgagcaggtacagaagctggtgtctctgcccatgtggatgtgtctgctgccg
acgaggcttcagcaggaactgaagacggtccctaaactgcagaagttctggaacctcatt
aaaaagaactatgagaagatgaacacgcaggatcaggagcaagcaaagaaagagcgcacc
ttcctcgcctccctcataaaaaagttcctggcagttctcgattccatctctgcatcaggc
ggcgtctccatggagaagattcactactgcgagcgattcattgagttcatgattgacctg
gaggctctgctcccgacccgccgttggttcaacactgtgctggacgatgctcatctgatg
gtcaaatgccagctgtctcacctcactggcagagagaaagagggtcacctgttctgccag
ctgctggacatgctgaagttctacaccggctttgagatcagtgatcagactggaaatgct
ctgacacagaaagagatgaccacgctgcactatgacagaatcacctctctgcagagagca
gcgtttgctcatttccctgagctcaatgatttcgccctgtctaatgtggcggctgtggac
acgcgagagtccctcaacaaacacttcggtcatctcagtcccagtaccctccaccgagtg
tcagcatacctgtgtctcctgcctgagcttcctgatggagaggaaaccacctaccataaa
gaattcctgctggagctgctggtgtcccatcacgagagacgaatctcacagatcgagcag
ctcaaccagatgcctctgtatcccactgaaaagatcatctgggatgagaacatcgttccc
accgagtactactcaggagaaggatgtttggctctcccgaagctgaatctgcagttcctg
accttgcacgactaccttttgagaaacttcaacctgtttcgactggaatccacctatgaa
atccgccaggatatcgaggacgttgttttacggatgaagccatggcagtcggagtatggt
ggcgtggtgtttggtggatgggccagaatggcacagaccatcgtctccttctctatagtg
gaggtggcgaagccgaacattggagagaactggccggctcgagtccgcgctgacgtcacc
attaacctcaacatccgagaccacatcaaaaatgagtgggaggggctgcggaagcacgat
gtttgctttctgatcacggtgcgacccaacctgccctacggcacacgcttcgaccgccgg
cagccgtttgtggatcaggccggtctggtgtacgtgaggggctgcgaggtgcagggcatg
ctggatgatcaaggccgcgtcattgaggaaggtcctgatccaaagcccaaattgagaggt
gacaccaggacgtaccgagtgtggctggactcgaaccaataccagcaggacatgaccaac
agcatccagagcggagcagaagatccctacgaaaccttcaacgtcatcatgaggcgcaaa
cccaaagagaacaacttcaaggctgtgctggagaccatccgtaacctcatgaacaccgaa
tgtgtggttcccgactggcttcacgacatcatcctgggttatggagaccctggtagtgct
cattactcaaagatgcccaatcagatctccagtctggacttcaatgacaccttcctgtcc
atccagcacctcagatcctgtttcccagagcacacggtcaaggtgacggaggaggatccc
gctagacagatgccaccattcagaatccacttccctgtgcagagtgtgaagggtaaaaag
cgtaaagcggatgaggaagcggctccgtgtgaggaagagcaggtgttgctagtggagcct
cacgtgactccaaacagaggcccgtatccgtacaaccagcccaaaagaaacaccatccag
ttcacacccacgcagattgaagccattcgtgcagggatgcagccaggccttaccatggtt
gttggtcctcctggcactggaaaaacaaatgtggctgttcagatcatctccaacctgtac
cacaacttccctgagcagagaacactcatcgtcacacactccaatcaggctttaaatcag
ctgtttgagaagattatggcgctagacatcgatgaacgccaccttctgcgtctgggtcac
ggtgaggaagaactggagacggagaaagatttcagcagatatggacgagtcaactatgtg
ctgtccagacgtctggagctcctgcaggaggttgcgcgtctgcaggagagtttagatgtt
cccggtgacgtctcctacacctgtgagactgcaggacacttctatctctaccagataatg
tctcgctgggaggaatacatgagtaaagtgaagccgaagcctggccgagaggtaccgacg
gaggacgtggcgacacactttcccttccacaagtacttctccaacgctcctcagccggtg
ttcagaggacagtccttccaggaggacatggacatcgctgagggctgctaccggcacata
cgcaagatcttcacccagctggaggagttcagggcgtttgagctgttgcgcagcggattg
gacagatccaaatacctgctggttaaagaagccaagatcatcgccatgacctgcacacac
gcggccctcaaacgccacgatctggtggagctcggcttcaagtatgataatatcctgatg
gaggaagcagctcaaatcctggagattgagaccttcatccctctgctgctgcagaaccca
gaggatggctacagtcggctgaagcgctggattatgattggagatcaccatcagcttcct
cctgtcattaagaacatggcctttcagaaatactccaacatggagcagtcgctgttcact
cgttttgttcgtctcggtgtcccaaccgtggacctggacgcgcagggcagagcgagagcc
agtctgtgtaacctgtacaactggcgctataagcagctggggaatcttcctcacgttcag
cttcagcctgagttccggacgccgaaccccggcttcaccttcgacttccagctcattaac
gtggaggatttcaacggcgtgggcgaatctgagcccaacccatacttctatcagaatctg
gcagaggccgagtattcggtggcgctgtacatgtacatgcgtctgctgggatatcctgct
gagcgcatcagcatcctgaccacctacaacggccagaagcatctgattcgagacgtcatc
caccagagatgcgccagtaactccttcttcgggcagcccagtaaagtgaccacagtcgac
cggttccagggtcagcagaacgactacatcatcctctcactcgtccgcactaaagctgtg
ggacatctgagggacgtgcggcgtctggttgtggccatgtctcgcgctaggctcggcctc
tacatattcgctcgagtttctctcttccagaactgctatgagctgacgccagccttcagc
cagctgaccgctcgtcctctgcatctgcacatccggcctcatgaatactacacctctacc
gaggctcgatcgtcccagccggatcaggtggtcaaggacatgccggagatggccaacctg
gtctacaacatgtacatgcacatgatgcagagcacacagcagtacagacaacagcagcag
cggctcctggatcctcctcgtcaggtgctcaaaccacaggggaagacagcggtgatggag
caggaggagaaggacaccacagcgacaacagaggaggagaagaacaccacagtgacaaca
gaggagaagaagaacaccacagcgaaaacagaggaggagaagaacaccacagcagcaaag
gaggagaagagcaccactgggacagaggaggagaagatgatcaccacagcagctgaagag
gagcagaagaacaccaaggctacagaggaggagccaatgatcacaacaacaacagaggag
cagcagaagatctccacagcgacagaggaggagccgacgatcgtcacggaggaggaggag
caggagcatgtgaagatgcctgagcatccgggccgagacagcgacagtggagacagcgaa
gaggacgagcaggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (16)   
   Pfam (16)   
All databases (69)   

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