KEGG   Danio rerio (zebrafish): 393467
Entry
393467            CDS       T01004                                 
Symbol
hnrnpa1a
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1a
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    393467 (hnrnpa1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    393467 (hnrnpa1a)
   03041 Spliceosome [BR:dre03041]
    393467 (hnrnpa1a)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     393467 (hnrnpa1a)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     393467 (hnrnpa1a)
Spliceosome [BR:dre03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    393467 (hnrnpa1a)
SSDB
Motif
Pfam: RRM_1 RRM_7 Nup35_RRM_2 PHM7_cyt
Other DBs
NCBI-GeneID: 393467
NCBI-ProteinID: NP_001349307
ZFIN: ZDB-GENE-040426-1546
Ensembl: ENSDARG00000011020
Position
11:complement(2236161..2250884)
AA seq 411 aa
MPPAITPKKEREAESAVSHRVTAMSKEQQTPREPEQLRKLFIGGLSFETTDESLRAHFEQ
WGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMDARPHKVDGRAVEPKRAVSREDSS
KPGAHSTVKKMFVGGIKEDTDEEHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDH
DAVDRIVIQKYHTVNGHNCEVRKALSREEMNRVSMNSRGGRGGGGGSGGGNFGRGGGGGG
GGGYGGGYGGGGGRGGGGGYGGGDGYNGYGGGNGGYGGGGPNYGGNRGYGSGGGGGGGGG
YGNQGGGYGGGGYDNYNNNGGGGGGGGNFGGGNFGGGGDYNDFGNYNNQSSSNYGPMKGG
NYGGGGGGGGRSGGGPYGGGYGGGSGGGGGYGGGSGGGGGGYGGGSGGRRF
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgccacccgccattacacctaaaaaagaaagggaagcggagtctgctgttagtcaccgc
gtgaccgccatgtccaaagagcaacagacccctcgtgagcccgagcagctccgaaagctg
ttcatcgggggcctcagtttcgagacgacagatgagagtctgagggcccatttcgagcaa
tggggaaccctcacagactgtgtggtgatgagggaccccaacacaaagaggtcgagggga
tttggctttgtcacctacagttcagtgggtgaagtagacgcagcgatggacgcacgtccc
cacaaagtcgacggacgggctgttgaacccaagagggccgtgtctagagaagactcgtcc
aagccaggcgctcactccactgttaaaaagatgtttgtgggtggaatcaaagaggacacg
gatgaggaacacttgcgcgagtacttcggccagtttggtaagattgacgaggtgaacatc
atgactgagaagaacagcgataagaggaggggcttcgccttcatcaccttcgatgaccac
gatgccgtcgacaggattgtcattcagaagtaccacacggtgaacggccacaactgtgaa
gtcaggaaagctctgtctagagaggagatgaatagagtgtccatgaattcacgaggaggc
cgaggaggcggtggtggcagcggcggtggaaactttggtagaggaggaggaggtggtggt
ggtggaggatacggaggtggatatggaggaggtggtggaagaggaggcggtggaggatac
ggtggaggcgatggatataacggctatggtggaggaaatggcggctatggaggaggcggc
cctaattatggtggtaaccgtggttacggcagtggtgggggtggaggcggcggcggtggc
tatggaaaccagggtggtggctatggtggcggcggctatgataactacaacaacaatggt
ggtggtggaggaggaggaggcaactttggaggaggaaacttcggaggtggcggagactac
aatgactttggaaactacaataatcaatcttcctctaactacggcccaatgaagggagga
aactatggcggcggcggaggtggtggtggaaggagcggtggtggaccatatggtggtggc
tatggaggaggctctggaggaggcggtggttatggaggaggatctggtggtggtggtgga
ggatatggcggaggctctggcggacggaggttttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (13)   
   RefSeq(nuc) (9)   
   GenBank (2)   
   EMBL (2)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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