KEGG   Danio rerio (zebrafish): 394092
Entry
394092            CDS       T01004                                 
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
  KO
K14397  cleavage and polyadenylation specificity factor subunit 5
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    394092 (nudt21)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    394092 (nudt21)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor Im (CFIm)
     394092 (nudt21)
SSDB
Motif
Pfam: NUDIX_2
Other DBs
NCBI-GeneID: 394092
NCBI-ProteinID: NP_957411
ZFIN: ZDB-GENE-040426-1316
Ensembl: ENSDARG00000003153
UniProt: Q7T3C6 B2GS95
Position
18:complement(22721551..22734963)
AA seq 228 aa
MSVVPPNRSSTGWPRGVNQFGNKYITQATKPLTLERTINLYPLTNYTFGTKEPLYEKDSS
VAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVE
GLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq 687 nt   +upstreamnt  +downstreamnt
atgtcagttgtacctcctaatcgatcatctaccggttggcctcgaggagtaaatcagttc
ggcaataaatacattacccaggcgactaaacccctcaccctggagagaacaatcaaccta
taccctcttacaaattacacattcggcaccaaggagccgctctatgagaaggacagctcg
gttgccgcacgctttcagcggatgcgggaagaatttgagaaaatcgggatgcggcggact
gtggagggtgttctgatcgtgcacgagcacagactccctcatgttctgctacttcagctg
gggacaaccttcttcaaactccctggaggcgagttgaaccctggagaggatgaggtggag
gggttgaagcgactaatgacagagattttgggacgccaggatggggtgaaacaggactgg
gtcattgatgactgcattgggaactggtggagaccaaactttgaaccacctcagtacccc
tatattccagcacacatcactaaacctaaagaacacaagaagcttttcctagtacagctg
caagaaaaagcattgtttgccgtgccaaagaactacaaactggtggctgctccgttgttt
gagctttatgataatgctcctggttatggcccaattatatccagtcttccacagctactg
agcaggtttaacttcatctacaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (37)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (57)   

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