KEGG   Danio rerio (zebrafish): 394143
Entry
394143            CDS       T01004                                 
Symbol
sfswap
Name
(RefSeq) splicing factor, suppressor of white-apricot homolog
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: DRY_EERY Surp
Other DBs
NCBI-GeneID: 394143
NCBI-ProteinID: NP_957462
ZFIN: ZDB-GENE-040426-931
Ensembl: ENSDARG00000005980
UniProt: F1Q5L3
Position
21:complement(15124992..15282456)
AA seq 958 aa
MYRRGGSKKEQNNATKEQSDSSKYAELLVFGYACKLFRDDERAFYHDQGKHLIPWMGDKN
IMIDRYDGRGHLHDLSEYDAGSWNHDYQLSEEEARIEALCDEERYLAMHTDLLEEEARQE
EEYKRLSEALADEGTYNAVAFRYSADYYDPSQPTEEDEASKEADQEQLEEESEEPFVAPP
GLLIPPDVELPATTKTHAIIERTANFVCKQGAQFEIVLKAKQAGNSQFDFLRFDHYLNPY
YKHILRAMKEGRYTPASEGKQDQQQESKSDESDDDDDGDGNYLHPSLFAPKKCSRLEEII
KPLQVIDPDHPLAALVRKAQQQNNGTAALVTNAEEEHQPSAVATQAEYTSDPNVAAMYYG
YCMLPDGTYCLAPPPPGIDASHYYASLPTGMMPAPPASGPPPPPGTTPLDPAVAIPSAPA
VGPVTVSAPASAPLPHSAPAPPTSSSRPPQTTVVPPPVVATAAPVAAIIPPPPDIQPVID
KLAEYVARNGVKFETSVRAKNDPRFDFLQSWHQYNSYYEFKKHYFMQKEGLSGQEGSLLY
GSGGDSAENSSDKQQDEGKLIKASFAPICFAIKSKENDLLPLEKNRVRLDDDSDEDAIKG
DVLEGMELAIGLLEAPREVPQPPLAEEKKPVLSQEELEAKQAKQKLEDRLAAAAREKLAQ
ASKESKERQLQAERKRKAALFLQTLRGPEAEVKRTEETTAAPEPLGSILPISGLLQHTCR
IPGFDYEPLENALTRSLNNAASHVTTSTSSSSSRGPERDRDRDRDRDRDRDKRKKKHKRR
SRSRSRSRSRSKSKTKHALPSAYRTFRRSRSQSRSPSRRDRRARSPDRKRDEREKESYGP
SNYRLGSNPALGRQRSRSRSPHEKKKRKSSKSSHFKGSSCSPSASPNRGRAVSRVSASPS
PATSPTSSLGRSRDGSQEKEKQVASTIVSSVQSKITQDLMAKVRAMLAASKGLQPNPS
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgtatcggcgcgggggaagcaagaaggagcaaaacaatgcgacgaaggagcagagcgac
agcagcaagtacgcggagctgctggtgttcggctacgcctgtaagctgttccgggacgat
gagagggccttctaccacgatcagggcaaacaccttatcccatggatgggggacaagaac
atcatgatcgataggtatgatgggcgtggtcatttacatgatctttcggaatatgacgct
ggctcgtggaatcacgactaccagctgtccgaggaggaggccaggatagaggctctgtgc
gatgaggagaggtacctggctatgcacaccgacctactagaagaagaggccaggcaagag
gaagagtataaaagactgagtgaagctttagcagatgaaggcacctacaatgccgtggcc
ttccgttacagcgcagactactacgatccctcccagcccactgaagaagacgaggccagc
aaagaagcagatcaagagcagctggaggaagagagtgaagagccgtttgtggctcctcct
ggtctccttatccctccggatgtagagctgcctgcgaccaccaagactcatgctattatc
gagcgcaccgccaactttgtatgcaagcagggggcccaatttgagattgtgctgaaggca
aagcaggctggcaactcccagtttgatttcctgcggttcgaccactacctgaacccttac
tacaagcacattctacgagctatgaaggaagggagatacacgccggcttcagagggcaag
caggaccagcaacaggaatcaaagtcagatgaatcagatgacgatgacgacggggatggg
aactacctgcacccgagcctgtttgcacccaagaagtgctctcgtctggaggaaataata
aagcctctgcaggtcattgatccagatcacccgttggcagcactcgttcggaaagcccaa
cagcagaataatggcaccgcagcgctggtaactaacgcagaagaagagcatcaaccgtca
gcagtggccacacaggctgaatacacctctgaccctaatgtggccgcaatgtactacggc
tactgtatgctgcctgatggtacatattgccttgcccctccacctcctgggattgatgcc
agccactattatgcttcgcttcccaccggcatgatgccagctcctcctgcatctggtcca
cctccccctcctggcactacacctttggatcctgctgttgcaatcccatcagcccctgct
gtaggtccagtcacggtgtcagctcctgcgtctgctccactcccccattccgctcctgct
cctccaacttccagttccaggcctcctcaaaccactgttgttcccccgccggttgtggcc
actgctgctcctgttgctgccatcatccctccgcctcccgacattcaacctgtcattgat
aaactagccgagtatgtggccagaaatggggtgaaattcgagaccagtgttcgtgccaag
aatgacccgcggtttgactttctgcagtcctggcaccagtacaactcctattatgagttc
aaaaaacactacttcatgcagaaagaaggcctgagcgggcaggagggttctctgctgtat
ggcagtgggggggacagcgcagaaaactcttctgacaagcagcaggacgagggcaagctc
attaaagcgtcctttgcacccatctgcttcgctattaagtcaaaagaaaacgatcttctg
cctttggagaagaaccgtgtgaggctggatgatgactctgatgaggatgcgattaagggg
gatgtgctggagggaatggagctggccattggattgcttgaggcgccaagagaggttcct
caacctccactggctgaggagaagaagccagtcctgtcacaggaagagctggaggccaaa
caagccaaacagaagcttgaggatcggttagcagcagcagcgagggagaaactggcccag
gcttccaaagagtccaaagagaggcagcttcaggctgagcgcaagaggaaagctgccctc
ttcctgcagactctgcgagggccagaggctgaggtcaagcgcactgaggaaactactgct
gcacctgagccattgggttccatcctgcctataagtggtcttcttcaacacacatgtcgt
ataccaggctttgactacgagccgctggaaaatgcactaactaggagcttaaacaacgct
gcttcccatgtgaccacctctacctcctcatcttcatctcgtgggcctgaaagggacaga
gacagggatagggatcgagatagagaccgggataaacggaagaagaaacacaagagaagg
tcccggagcaggtctcggtcacgctcccgatccaaatccaaaaccaagcatgctttgccc
agtgcctaccgcaccttcaggagatccaggtctcagtctcggtcccccagtcgcagagac
cggcgggctcgttctccagacagaaagcgtgacgagagggagaaagagagctatggtccc
agcaactaccgtcttggcagcaacccagcactgggcaggcagcgctcaagatcgagatca
cctcatgaaaaaaagaagcgaaagagttccaagtcatctcattttaagggttcctcctgt
tcaccctcagcgtctccaaacagaggcagagccgtgagcagagtctctgcaagcccctcc
cctgccaccagccccacctccagcttggggagatccagggatggctctcaggagaaagaa
aagcaagtggcctccactattgtctcttcagtacaaagcaaaatcactcaggacctcatg
gcgaaagtaagagcgatgcttgcagcatccaaaggcctccagccaaacccctcctga

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Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (60)   

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