KEGG   Danio rerio (zebrafish): 402935
Entry
402935            CDS       T01004                                 
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
  KO
K23460  Rab proteins geranylgeranyltransferase component A
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:dre01006]
    402935 (chm)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    402935 (chm)
Prenyltransferases [BR:dre01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   402935 (chm)
Membrane trafficking [BR:dre04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    402935 (chm)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    402935 (chm)
SSDB
Motif
Pfam: GDI NAD_binding_8 DAO
Other DBs
NCBI-GeneID: 402935
NCBI-ProteinID: NP_982286
ZFIN: ZDB-GENE-030318-2
Ensembl: ENSDARG00000003845
UniProt: Q6RFG0
Position
21:34686796..34793908
AA seq 666 aa
MAAEDLPSQFDVVILGTGLTESVIAAACSRVGQSVLHLDRRNYYAGNWASFTFNGLLSWI
EEYKNQQELQITESEQEWRSLIEDGEEAVPLNSVDSSISNLEVFCYASEEEEQEEETKDL
LTCPNAETVSEETNSDSTETQDTVTSDDVTESNVKVQNEENEDSAPKEQLHASDISEHSQ
SVEEKQPNRSPADPPAELQKKITYQKLLKEGRRFNIDLVSKLMYSRGALVDLLIKSNVSR
YAEFKNIGRILTCRNGKVEQVPCSRADVFASKQLTVVEKRMLMKFLTFCLDFEQHPEEYQ
DYSEKPFSEFLKNKKLTENLQDFVLLSIAMVTQQTLTEEGLKATQHFLRCLGRYGNTPFL
FPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKESNKVKAVIDTRGQKIGCSHFVV
EDSYIREEQRESIDYRQISRAVLITDRSVLPSESDQQISLVTVPPVESSGPAVRMVELCS
SSMTCMPGTCLVHLTCSSSGTAQQDLAPVVSQLFHIPTTPGEDPSEGTGEISKPAVLWVM
YFNMRDTSAMDSSCYSLPSNVHVCTGPDAGLGSDYSIKLAESVFHCLLPDEEFCPPAPNP
EDIIYDGDAPQAEGRGFDESNDTEANKSQAEEEGTTNETNPENSEAAEMDSVAQETTLDT
NPPSEE
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggctgcggaggatctcccgtctcaatttgatgttgtcattctcggaacaggcctcact
gagtctgtcattgctgcggcctgctccagagttggacaaagtgttttgcatctggacagg
aggaactattacgctggaaactgggcaagcttcacttttaatggcctgctgtcgtggatt
gaggaatataagaatcagcaggagcttcagatcacagagtcggagcaagaatggaggagc
ttgattgaagatggggaagaagcggtgcctcttaactctgtcgattcttctatttccaac
ttagaagttttctgttatgccagtgaggaagaggagcaagaagaggaaaccaaagacctg
ttaacatgtccgaatgctgaaactgtatcggaagagaccaacagtgactctacagaaact
caagacacggttacaagtgatgatgttacagaatcaaatgttaaagtgcagaatgaagag
aatgaagattctgcgccaaaagagcagctacatgcatcggatatttctgaacacagccag
tcagtggaggagaaacagcccaacagaagcccagcagatccacctgcagagctgcagaag
aagataacatatcaaaagctgttgaaagagggacgccggttcaacattgacctggtctca
aagctgatgtattcacgtggtgcactggtggatctgctcattaaatctaatgtgagccgc
tacgcagagttcaagaacatcggccgcatcctcacttgcagaaatggaaaagtggagcag
gtcccatgttcacgggcagatgtgtttgccagcaagcagctgaccgtggtggagaagcgc
atgctgatgaagtttcttaccttctgtctggactttgagcagcacccagaggagtaccag
gattactcagagaaaccgtttagtgagttcctgaagaataagaagctcactgagaacctt
caagattttgtcctgctctcaatcgctatggtgacgcaacagaccctcacggaggaagga
ctaaaggccacacagcacttcctgcgatgcctgggtcgctacggcaacactcccttcctg
ttccccctctatggccttggagaaatcccacagtgcttttgcagaatgtgtgccgtattt
ggaggaatttattgtctgcgacactcggtgcaatgtctagttgtggataaggagtccaac
aaagttaaagcagtgattgatacacgtggccagaagatcggctgcagtcattttgtggtt
gaagattcctacatcagagaggagcaaagagagagcatcgattacaggcagatatctcga
gcagtgttaatcacagacagatctgtgctgccttcagaatctgaccagcagatctctttg
gtgaccgttcctcctgtggaatcttctggaccagctgtgaggatggttgagctgtgttcg
tcctccatgacctgcatgcctggcacctgtttggtccacttgacctgttcatcgtctggt
acggcccagcaagatcttgctccagtagtatctcaattatttcacattcccaccactccg
ggagaagatccttcagaaggcacaggggagataagcaagcctgcagtgttatgggtcatg
tacttcaacatgagggacacgtcagccatggacagcagctgctacagcctaccgagcaac
gtccacgtgtgcactggtcctgatgccggactgggcagcgactactccattaaactggct
gaatcagtatttcactgtctgctccctgatgaggagttctgcccgcctgcacccaaccct
gaggacatcatctatgatggtgacgctccacaggctgaaggacgagggtttgatgagagt
aatgacacagaagcgaataaaagccaggcagaggaagaaggaaccaccaatgagacgaat
cctgagaactctgaagcagcagagatggacagtgttgcgcaggagaccacgctggacacc
aatccaccgtctgaagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (44)   

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