KEGG   Danio rerio (zebrafish): 405784
Entry
405784            CDS       T01004                                 
Symbol
runx2a
Name
(RefSeq) RUNX family transcription factor 2a
  KO
K09278  runt-related transcription factor 2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    405784 (runx2a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   Runt
    405784 (runx2a)
SSDB
Motif
Pfam: Runt RunxI PKD_5
Other DBs
NCBI-GeneID: 405784
NCBI-ProteinID: NP_998023
ZFIN: ZDB-GENE-040629-3
Ensembl: ENSDARG00000040261
UniProt: Q6U1J2
Position
17:5351922..5516693
AA seq 467 aa
MASNSLFSSVTPCQQNFFWDPSTSRRFSPPSSSLQPVAGKMSDAQPEPNAVVPRLRPHDN
RTMVEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGDVPDGTVVTVMAG
NDENYSAELRNASAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKV
TVDGPREPRRHRQKLEDPPKPPLFSERLSELERLRQTTMRVAVQTQSPRPSLNATPNSFN
PQGQTQISDPRQAQSSPPWSYEQPYPPYLSQMTSPSIHSTTPLSSTRATGLPTISDVPRR
LSGTSELSPFSADPRQFERQFPSLSSLTDSRFPSPRMHYPATFTYTPTPVTSGMSLGMST
TTHYHTYLPPPYPGSTQNQSGPFQTSSTPYLYYGASSGSYQFPMVPGGDRSPSRMLPPCT
SASTGSTLINPNLPNQTDGGEADGSHSSSPTVLNSSGRMDESVWRPY
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggcgtctaacagtcttttcagctcggtgactccgtgtcagcagaactttttctgggat
ccgagcaccagccgcaggttcagtccgccgtccagcagccttcagccggtggcggggaag
atgagcgatgcgcagccggagccgaacgcggtggtgccgagactccgacctcacgacaac
cggaccatggtggagatcatagcggaccaccccgccgagctcgtgcgcacggacagcccc
aactttctgtgctcggtgctgccgtctcactggaggtgcaacaaaacgctccctgtggcg
tttaaggttgtggctctgggagatgttcctgacgggacggtggtgacggtaatggctgga
aatgacgaaaactattcggctgagctgagaaacgcctccgctgtcatgaagaatcaggtg
gcgcgtttcaacgacctgagatttgttggcagaagtggaagaggaaagagcttcacgctg
acaatcacagtattcacgaacccaccgcaagtggccacttaccaccgagccataaaggtc
acagtggacggaccgcgcgagccacgaagacacagacagaaactggaagacccccctaaa
ccgccgctgttctccgagcgcctgagcgaattagagcgtttacgccagaccaccatgaga
gtcgctgtgcaaacccagagtccccggccgtctctcaacgccacgccgaactccttcaat
ccgcaggggcaaacgcagatctcagaccctcggcaggctcaatcctctccgccctggtcc
tatgagcagccgtatcctccatacctgagccaaatgacgtctccctccatccactccacc
accccgctgtcctccacccgtgccaccggcctgcccaccatcagcgacgtgccacgacgc
ctctcaggtacgtcagaactcagtccattctcagccgacccacgccagtttgagcgtcaa
ttcccaagcctgtcgtccctcacagacagccgctttcccagtcccagaatgcactatcca
gcaacattcacctacaccccaacaccggtgacctccggcatgtctctgggcatgtccacc
accacccactaccacacatacctgcctccaccgtaccccggatccacccagaaccaaagt
gggcccttccaaaccagcagcacaccatatctctactacggcgcctcatccgggtcatac
caattccccatggtgccagggggtgatagatccccatccaggatgcttccaccttgcact
agcgcatccaccggcagcaccctcatcaaccccaacctgcccaatcagacggatggaggt
gaggcggacggcagccacagcagctctccaactgtgctcaactccagtggcaggatggac
gagtccgtgtggcggccatattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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