KEGG   Danio rerio (zebrafish): 405792
Entry
405792            CDS       T01004                                 
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
  KO
K24889  iroquois-class homeodomain protein IRX
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    405792 (irx5b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain TALE
    405792 (irx5b)
SSDB
Motif
Pfam: Homeobox_KN Homeodomain MRP-S32
Other DBs
NCBI-GeneID: 405792
NCBI-ProteinID: NP_001001405
ZFIN: ZDB-GENE-040628-5
Ensembl: ENSDARG00000074070
UniProt: Q6R5L3
Position
25:36152298..36155668
AA seq 371 aa
MAFPQGYLYQSSLSLYSCPPYGSTGITAPRTDDLGRSSSGSAFSPYASTAFTNTTVAFSS
LQYSPESAAPFTSYGGSPYDPSPGMTGSIGYHPYAGPLGPYPFGDPAYRKNATRDATATL
KAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRTRSEDE
DEEDSIDLEKNDEDDEPMKTAESTKDSETRAEDHDDSTDSVIIDCGEEEENRTESPVPTT
SSPQDELSESTIKPLSGNCKPTSVIPSPNPKPKLWSLAEIATSDKGREEVSHTSRAGSPQ
CTFPARHLYYASPFFVGFSNYGAFGHLNGCGGGNSTHLNGINQAVLHRTRDSKLTLEMCK
ELTFEHKRANI
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggcgtttccacagggatacttgtaccagtcgtcgctgtctctgtactcgtgtccgccg
tacggctccaccgggataacggcaccgcgaacggacgatctgggacggtcctccagtgga
tctgctttttccccgtatgcgtccacagccttcacgaacaccaccgtcgccttcagctcc
ctccagtacagcccagaatccgcagcccccttcacttcatacgggggctccccatatgac
ccttctccaggcatgaccggctccatcggctatcacccgtacgccggtcccctgggcccg
tacccgttcggggaccccgcttaccggaaaaacgcaacgcgcgacgccaccgccaccctg
aaggcctggctcaacgagcaccgcaaaaacccttatcccaccaaaggagagaagatcatg
ctggccatcatcaccaaaatgaccctcactcaagtgtccacctggttcgccaacgcgcgc
aggaggctgaaaaaggaaaacaagatgacgtggacgcccaggacgcggagcgaggatgag
gatgaagaggacagcattgatttggagaaaaatgatgaagatgatgagcccatgaagaca
gccgagagcaccaaagattcagaaacccgtgcggaagaccacgacgactccacggacagt
gtgataatcgactgcggggaagaagaggaaaaccggacagagtctccggtgcccacgacc
tcctctccccaagacgaactgagtgaaagcacgattaagcccctcagcggaaactgcaag
cccacatctgtcatcccctccccgaaccccaaacccaaactctggtctctggcagaaatc
gctacgtcggataaagggcgcgaggaggtgtcacatacgtcacgcgcggggtcaccacag
tgcacgtttcccgccagacatttgtactacgcgtctccatttttcgtgggtttctcgaac
tatggcgcctttggacatttgaacggctgcggtggcgggaactcgacacacctgaacgga
ataaaccaggcggtgttacacagaaccagagacagcaaactgactctggagatgtgcaaa
gaactcactttcgagcacaagagggcgaatatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (33)   

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