KEGG   Danio rerio (zebrafish): 406246
Entry
406246            CDS       T01004                                 
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    406246 (sox21b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    406246 (sox21b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp
Other DBs
NCBI-GeneID: 406246
NCBI-ProteinID: NP_001009888
ZFIN: ZDB-GENE-040429-1
Ensembl: ENSDARG00000008540
UniProt: Q6RVD7
Position
9:53276356..53277702
AA seq 245 aa
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVAYNLGEHEALKVGGLPAGALTESL
MSNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFSYASPLGYPTAATA
FSGAVGGGAHTHTHSHPSPGNPGYMIPCNCAAWPSAGLQPPLAYILLPGMGKPQLEPYPA
YAAAL
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtccaagcccatggatcacgttaagcgtcctatgaacgcgttcatggtctggtcccga
gcgcagcggcggaaaatggcccaggagaacccgaaaatgcacaattccgaaatcagcaag
cgcctcggagcggagtggaaacttctgacggagtctgaaaagaggccgttcattgacgaa
gccaagcgcctgcgggcgatgcacatgaaggagcaccccgactacaaatacagaccccgg
aggaagcccaagactttaatgaagaaggacaaattcgcgttcccggtggcgtataatttg
ggagagcacgaggcgctgaaggtgggcggcttaccagccggagcgctcaccgagtctcta
atgagcaacccggacaaggcagcggcggcggcggccgcagcggcggccagggtgttcttc
aacccctcaatgtccgcaaacccgtactccttttttgatcttggctcaaaaatgaccgaa
ctttcgccaccgtctttctcctacgcctcaccattgggttacccaacagcggcgaccgcg
ttttcgggcgcagtcggcggcggagcgcacacacacacgcactcgcatccttcaccgggt
aaccccgggtacatgatcccgtgtaactgcgcagcctggccgtcagcggggctccagccg
ccccttgcatacattttactacccggaatgggaaaaccacaacttgaaccgtatcccgcg
tacgcggcggcgttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (24)   

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