KEGG   Danio rerio (zebrafish): 407613
Entry
407613            CDS       T01004                                 
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
  KO
K14946  RNA binding protein fox-1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    407613 (rbfox1l)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    407613 (rbfox1l)
SSDB
Motif
Pfam: Fox-1_C RRM_1 RRM_5
Other DBs
NCBI-GeneID: 407613
NCBI-ProteinID: NP_999940
ZFIN: ZDB-GENE-040923-2
Ensembl: ENSDARG00000021184
UniProt: Q7ZT82 B3DK66
Position
16:complement(31900129..31919281)
AA seq 382 aa
MLSSPTVILQPYGLPVYPQTASCYPGIVQGAAAQEAGPGNGDPSLPQVYAPPPSYPPPGQ
APPTPAARLPPLDFSAAHPNSEYADHHQLRVYQGPQHDGTESITASNTDDSLAPVTSDPQ
SLSVSVASGSGAAGGSDEEGGGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF
NERGSKGFGFVTFESAVEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNAAGW
KINPVMGAMYAPELYTVASFPYPVPTPTLAYRGSGLRGRGRAVYNTIRSAAAAATPAAVP
AYPGVVYQEGLYGAEVYGGYPATYRVAQSASAAATATYSDGYGRVYATATDPYHHSVGPT
TTYGVGTMASLYRGGYNRFTPY
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgttgtcttctcctactgtgatccttcagccctacggactcccagtttaccctcagacg
gcctcctgctaccccggcattgttcagggtgctgctgcccaggaggcggggccaggcaat
ggtgatccttcacttccccaggtttatgccccacccccttcatatcctccacctggacaa
gccccgcccacacctgctgcccgactgccacccctcgatttcagcgctgctcatccaaat
tcagaatatgcagatcatcatcagctgagagtctaccagggccctcagcacgacgggacg
gagtctataactgccagtaacacggatgattctctggcacccgtgacgtctgacccacag
tctctcagtgtttctgtggcctccggtagcggagctgcaggaggaagtgacgaggaagga
ggtgggaaggctcaacctaaaaggctccatgtttccaatatcccttttaggtttcgagac
ccagacttgaggcagatgtttgggcaatttggcaagattctagatgtagagatcatcttt
aatgagagaggatccaagggttttggatttgtgacgtttgaaagtgcagtggaagcagat
cgagccagagagaagctcaacggtacgatcgtggagggaaggaagattgaggtgaacaac
gctacagcaagggtggtaacaaaaaagccccagacgccattagttaatgctgccgggtgg
aaaatcaatccagtaatgggtgccatgtacgcccctgaactttatacagttgccagcttc
ccctatcccgttcccacaccaaccttggcctacagaggctctggtctccgtggacgaggt
cgagcagtttacaacacaatccgctccgcagccgccgctgccacaccagctgcagtgcca
gcctacccaggagtggtgtatcaggaaggactgtatggtgctgaggtctatggaggatat
ccagccacatatcgagtggcccagtcggcctcagcagctgcaaccgccacatacagtgat
ggatatggaagagtctatgccacagcaacagacccctaccatcactccgtgggacccaca
accacttatggagttggaacaatggccagtttataccgtggtggctacaaccgcttcaca
ccatactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (11)   
   RefSeq(nuc) (5)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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