KEGG   Danio rerio (zebrafish): 407985
Entry
407985            CDS       T01004                                 
Symbol
tcf12
Name
(RefSeq) transcription factor 12
  KO
K15603  transcription factor 4/12
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    407985 (tcf12)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Ubiquitous (class A) factors
    407985 (tcf12)
SSDB
Motif
Pfam: HLH PHtD_u1
Other DBs
NCBI-GeneID: 407985
NCBI-ProteinID: NP_999981
ZFIN: ZDB-GENE-040516-11
Ensembl: ENSDARG00000004714
UniProt: A0A0R4IBL7 A0A9B0A4S3
Position
7:complement(52516709..52709898)
AA seq 533 aa
MYCAYPVPGMGSMYYYNGKSVYAPSPSSEDFNRDSPSYPSPKPPGSMFASTFFDGTHNSS
DQWNLSNGISQPGYGGMLGGSSSHMPQSGNYSNLHSHDRLNYPPHSVSPTDINASLPPMS
SFHRSSASTSPFVTASHTPPVNTTEGVMAAANRGNATGSSQTGDALGKALASIYSPDHTS
SSFPSNPSTPVGSPSPLAVQAGAATAGTVVTASGPAGRAGTTQWTRATGQAPSSPSYENS
LHSLSRMEDRLDRLDDAIHVLRNHAVGSTAALSNDIHSLLGQAHNGPISAIGSSFPSSGL
VTNRTAQMGSVHREESGSLNNNNHSALQASAAPTSSSELNHQADAFRAIAGVLASQVASP
LGLKVENQDKDDMHDSHASDDLKSDDESDKRDMKQNRGSSRPSCELSCSSINEDEDLNPE
QKAERERERRMANNARERLRVRDINEAFKELGRMCQLHLKSEKPQTKLLILHQAVAVILS
LEQQVRERNLNPKAACLKRREEEKVSGVSGDPQQAHPAVHPGLTDTSNPMGHL
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgtattgcgcctaccccgtgcctggaatgggcagcatgtattactacaacggaaaatcg
gtgtatgcaccatctcccagctcagaggacttcaacagagactctccgtcttatccgtct
ccaaaaccccccggcagtatgttcgcaagcactttctttgatgggacccacaattcctct
gaccagtggaacttgtccaatgggatcagtcagccaggctatgggggaatgctgggagga
tcttcatctcacatgccacagtctggaaactacagcaacctacactcacacgaccgcctg
aactatccgccacactcggtgtcgcccacagacatcaacgctagtctgccacccatgtcc
agcttccaccgcagcagtgccagcacctcacccttcgtcaccgcatctcacaccccgcct
gtcaacaccacagagggggttatggctgctgccaaccgagggaacgccactggaagctct
cagactggagacgcactgggaaaagccctggcttcgatttattctcctgaccacaccagc
agtagtttcccctcaaacccctccactccagtggggtctccctctccgctggcggttcag
gcaggcgctgccacagcaggtacagtggtgacggccagcggccccgcaggaagggcaggt
acaactcagtggactcgtgcaacaggacaggcaccttcctccccaagctacgagaactcc
ctccactctctgtctcggatggaggaccgacttgacaggctggacgatgcgatccacgtc
ctgaggaatcacgctgtgggctccactgctgctctttctaatgacattcacagcctgttg
ggacaagcgcacaatgggccaatctcagccatcggcagcagtttcccttcttctggattg
gtcaccaaccgaacagcacaaatgggctctgttcaccgtgaagagagcggcagcctgaac
aacaacaaccacagcgccctgcaggccagcgctgcgcccacctccagctctgagctcaac
caccaggcagacgccttcagagcaattgcaggtgtattggccagtcaggttgcttctcct
ctggggttgaaagtggagaatcaagataaagatgatatgcatgacagtcatgcctctgat
gacctgaaatcagacgatgagagcgataaaagggatatgaagcagaatcgaggaagctct
agaccaagttgtgaactgtcctgcagcagtatcaatgaagatgaggatctgaaccctgaa
cagaaagcggagcgtgagcgagagagaaggatggccaacaacgcccgcgagaggctacga
gtgcgggacatcaacgaggccttcaaagagctgggccgcatgtgtcagctgcacttaaag
agcgagaaaccccagaccaaactgctcattctccatcaggccgtcgccgtcattctcagc
ctcgaacagcaagtcagagagaggaacctgaaccccaaagcagcctgccttaagaggagg
gaggaggagaaggtgtcaggggtttcaggtgacccccagcaagcccaccccgctgtgcac
ccgggcctcacagacacatccaaccctatgggccatctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (13)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (14)   
   RefSeq(nuc) (10)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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