KEGG   Danio rerio (zebrafish): 415179
Entry
415179            CDS       T01004                                 
Symbol
tsg101a
Name
(RefSeq) tumor susceptibility 101a
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
dre04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    415179 (tsg101a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    415179 (tsg101a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    415179 (tsg101a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    415179 (tsg101a)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    415179 (tsg101a)
Exosome [BR:dre04147]
 Exosomal proteins
  Proteins found in most exosomes
   415179 (tsg101a)
SSDB
Motif
Pfam: UEV Vps23_core DUF3450 UQ_con APG6_N Het-C SlyX FapA Prominin Xpo1 Exonuc_VII_L Spc7 GPS2_interact S6OS1 DUF5685 EMP24_GP25L V_ATPase_I Nsp1_C CCDC90-like DivIC
Other DBs
NCBI-GeneID: 415179
NCBI-ProteinID: NP_001002089
ZFIN: ZDB-GENE-030217-1
Ensembl: ENSDARG00000040854
UniProt: Q6IQ70
Position
25:complement(25132711..25142373)
AA seq 390 aa
MAVVNEGALKKMLKQYKYRDLTVREITNVISQYKDLKPVMDAYVFNDGSSRDLMSLTGTV
PVSYRGNVYNIPVCLWLLDTYPYNPPICFVKPTSAMMIKTGKHIDANGKIYLPYLHEWKH
PQSDLYGLIQVMIVVFGEEPPVFSRPTTQPPYQAFQATGPPNQSYMPGMPAVSPYGPNQN
PCGYPGYPYPGGNAYPATGGPSHYTSQTPVTTVGPSRDGTIGEDTIRASLISAVSDKLRW
RMKEEMDRAQAELDALKRTEEDLKKGHQKLEDMVSRLDQEVAEVDRNIELLKKKDEELSE
ALEKMENQSENNDIDDVIIPTAPLYKQILNRYAEENAIEDTIFYLGEALRRGVIDLEVFL
KHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq 1173 nt   +upstreamnt  +downstreamnt
atggctgttgtcaacgaaggagctcttaaaaagatgctgaagcaatacaaatacagagat
ctcactgtgcgagagataacaaatgtcatatctcagtacaaagacctcaaacctgttatg
gatgcatatgtatttaatgatggatcctccagagacttgatgagcctcacaggaactgta
ccagttagttatagagggaatgtatacaatattcctgtgtgcttgtggcttttggacaca
tatccctacaatcctcctatatgttttgtgaagcccaccagtgcgatgatgattaagaca
gggaaacacattgatgccaacggcaagatctacctgccctacttgcatgagtggaaacat
cctcagtcagatttatatggacttatccaggtcatgattgttgtttttggtgaagagcca
cccgttttctccagacccaccacacaacctccatatcaggctttccaagcgactggacct
ccaaaccagtcttatatgccaggcatgccagcagtatctccctacgggcccaaccaaaac
ccatgtggttacccaggttacccttacccaggagggaatgcttatcctgccacaggtggc
ccatcacattatacttcccagactccagtcactactgtgggtccaagtcgtgacggcacc
atcggtgaggacaccattcgagcatcactaatctcagctgtgagtgacaaactacgctgg
agaatgaaggaggagatggacagagcacaggccgaactagatgccctaaagaggacagag
gaggacctgaagaaaggacatcagaaactggaagatatggtgtcccgtctggaccaggaa
gtggctgaagtggacagaaacattgagcttctcaagaagaaggatgaagaactgagtgaa
gctcttgagaagatggagaatcagtcagaaaacaatgatattgatgatgtgatcatacca
acagccccgctctacaaacagatcctgaaccggtatgcagaggagaatgcaatagaggac
accatcttttaccttggagaagccttacgtagaggagtcatcgatctggaggtctttctc
aagcatgtgcgcctactgtcccgaaaacagtttcagttgcgagcacttatgcagaaagca
cgaaagactgctggacttagtgatctatactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (20)   
   Pfam (20)   
All databases (51)   

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