KEGG   Danio rerio (zebrafish): 432389
Entry
432389            CDS       T01004                                 
Symbol
ift172
Name
(RefSeq) intraflagellar transport protein 172 homolog
  KO
K19676  intraflagellar transport protein 172
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:dre03037]
    432389 (ift172)
Cilium and associated proteins [BR:dre03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B2
   432389 (ift172)
SSDB
Motif
Pfam: WD40 Clathrin ANAPC3 Coatomer_WDAD RMC1_N
Other DBs
NCBI-GeneID: 432389
NCBI-ProteinID: NP_001002312
ZFIN: ZDB-GENE-040827-1
Ensembl: ENSDARG00000041870
UniProt: Q5RHH4 B3DK94
Position
20:38837238..38900415
AA seq 1745 aa
MQLKYMKTLLTPQDGAAKVTCMAWAPNNAKFAVCTIDRVVILYDEQGEKRDRFTTKPADP
KYGKKTYVVKSMAFSPDSTKIAVAQTDNIIFVYKIGEEWGDKKVICNKFIQTSAVTSLVW
PSEHAIIFGLAEGKVRQANTKTSKSSTIYGTDSYVVSLTSNVSGKGILSGHADGTVVRYF
IDDEGSGESQGKLLTHACPPYALAWGTNSIIVAGCDKKIVAYGKEGNVIQTFDYSRDRAE
KEFTVAASSPSGQSIVVGSFDRLRVFNWSPRKGTWDESSPKEIPNLYTITALSWKKDGSR
LSVGTLCGGVEMFDCCLRRSIYKNKFEMTYVGLSQVIVRNLSTGTRVVLKSQYGYEIDEV
KVMGKDQYLVAHTSDTLLLGDLVSNKLSEVAWQGSGGNEKFFFENETVCMIFNAGELALV
EYGSNDILGSVRTEFINPHLISVRLNERRQRGVEDNKKLAYLIDIKTIAIVDLVGGYNLG
TISHDSKIDWLELNETGRKLLFRDKKLRLHLYDIESSVKSTMLSFCPYVQWVPGSDVVVA
QNRGNLCVWYTIDSPERVTMFPLKGDIVDLERSNGKTEVIVNEGVNSISYTLDEGLIEFG
TAIDDGDYYRATAFLETLEMSAETEAMWKTLSKLSLEAQQLHIAERCFAALGDVSKARFL
NETNKIADAVAKEYDGDGTDHYQVKARLAMLDKNFKLAEMYYMEQNAVDEVMEMYQELHM
WDECIAVAEGKGHPELDNLRRSYYSYLMETNQNEKAAEVKENEGDFTGAVNLYLKAGLPA
KAAWLAMSKDELLSSQDIISRITAALIKGEFYERAGDLFERTRNNQRALECYRKGNAFKK
AVDLARVAFPAEVVKLEEVWGDYLVQQKQMDAAINHYIEAGRSTKAIEAAIAARQWKKAL
HILELQEDRTAAKYYLKIAQHYASLQEFEVAERLFVKGDHIKDAIDMYTQAGRWEQAHKL
AVKCMTQEDVSVLYVSRAQELEKEGKYKEAERLFTTVDEPDLAITMYKKNKMYDDMIRLV
AVHHKDLLQETHIHLAKELEAESRFQEAEYHYLEGQDWKAAVNMYRVNDMWEEAYRIAKT
HGGANAHKQVAYLWAKSLGGEAAVKLLNKFGLLETAIDFAADNYTFDFAFELARLSMKQK
IPDIHLKNAMFLEDQGNFNEAEIEFIKAGKPKEAVLMHVHNKDWSNAQRVAEAHDPESVA
DILVSQAKFCFDQKEFQKAEAFLLRAQRPELAIKYYKDAGMWTDAMRICKDYLPSKLSVL
QKEYESEGNWGVEGMIEQAQEWEQTGDYSRAVDCYLKVKDSSNLDLLLKCWMKAAELAIK
FLSHDKAVDVSQIVGPRLIQLRKYNEAAELYLNLDLIKNAIDAFIEGEEWNKAKRVAKEL
DPRLEEYVDKRYKEHLKNQGKVDSLVGVDVVAALDMYAERGQWEKCIDTASKQNFKVLHK
YIALYATHLIKEGEVEKVLSLYIQHGVPAYSQNFNIYKRMFQELVNLRDRDCAEAFRMWS
DLRDVLLLLCENLTKSSEANSPAHEEFEQMLLVAHYYATRSAAKGIDQLSSVAAKLSISL
LRHTELIPADKAFYEAGLAAKAVGWENMAFIFLNRFLDLADGIDEGTLDALDHTDFQDTD
IPFEVPVPSRLHVTVEKREEIREWVLTVSMDQRVEQVLPKDERGTYEASLVAASTGIRSL
PCVITGYPVLRNKIEFKRPGMAANKDDWNKFLMATKTTHSPECQDVLKFITQWCGGLPSA
GYSFH
NT seq 5238 nt   +upstreamnt  +downstreamnt
atgcagcttaagtacatgaagactcttttaacgcctcaggatggagctgctaaagtcacc
tgtatggcttgggctccaaacaatgcaaagtttgcagtgtgcactattgatagagtggtt
attttgtatgatgagcagggagagaaaagagacagatttacaacaaagcctgctgaccca
aaatacggaaagaaaacctatgtggtcaagtctatggcattttcccctgattcaaccaag
atagcagttgctcaaacagacaacatcatatttgtttacaaaattggagaggagtgggga
gataaaaaggttatttgcaacaagttcattcaaacaagtgctgttacaagcctggtttgg
ccgtctgagcatgcaattatatttggactagcagaaggaaaagttcgacaagctaataca
aaaacaagcaagtcctcaacaatctatggaacagactcttatgttgtctcactaacctca
aatgtatcaggaaagggaatcctttccggtcacgcagatggaacggtggttcggtatttc
attgatgatgaaggatctggggaatctcagggcaaactgctgactcatgcatgtccacca
tatgccttagcatggggcacaaacagcataattgtggctgggtgcgataagaagattgtt
gcctatgggaaggagggcaacgtgattcagacatttgattacagccgagatcgagccgaa
aaggaattcactgtggctgcatcgagccctagtggccagtccatagttgtaggaagcttt
gacagattgcgagtttttaattggagtcctcgaaaaggcacatgggatgaatcttctccc
aaagaaattccaaacctgtacaccatcacagctctctcctggaaaaaagatggctctcgg
ctttctgtgggcactctgtgtggaggtgtcgagatgtttgactgctgtctccgacggagt
atttacaaaaacaaatttgagatgacatacgtaggactaagtcaggtgattgtgaggaat
ttgtccactggcacacgagtagtactgaagtctcagtatggctatgagatagatgaggtg
aaagtcatgggaaaggatcaatatcttgtggctcatacctctgacacactgctactgggg
gatctggtgtccaacaaactaagtgaggtggcgtggcagggctctgggggaaatgaaaag
tttttctttgagaatgaaacggtgtgtatgattttcaatgctggagagctggcactggtg
gaatatggaagcaatgacatcctgggatctgttcgaacagagtttataaacccacacctt
atcagtgtgcgtctgaatgagaggaggcagaggggagtggaggataacaaaaagttggcc
tacctgattgacatcaaaactattgctatcgtggacctggtgggggggtataatctaggc
acaataagccatgactccaagatagactggctggagctgaatgaaacgggccgtaaactg
ctttttagggacaagaaactcaggctccacctttacgatatagagagtagtgtgaagagc
accatgctgagtttctgcccttatgttcagtgggtaccgggcagtgatgttgttgtggct
cagaatagaggaaacctgtgtgtttggtacaccatcgacagcccagagagggtcacaatg
tttcccctcaagggtgatattgtagacctggagagatctaatggtaaaaccgaggtcatt
gtgaatgaaggggttaactcaatctcctacactctggatgagggactcattgaatttggc
acagcaattgacgatggggattattacagagccacagcattcctggagaccctggagatg
tctgcagagacagaggccatgtggaagactctgagtaaactctccctggaggctcaacag
ctccacatcgctgagaggtgttttgcagcccttggcgatgtgtccaaagcccgtttccta
aatgagaccaataagattgcagatgcggttgcaaaagaatatgatggtgatggaacagac
cactatcaggtgaaagcacggctggccatgctggataagaactttaagcttgcagagatg
tattacatggagcagaatgcagtggatgaagtcatggaaatgtaccaagagctccacatg
tgggatgaatgtattgcagtggcagaaggaaagggccacccagagttggataatttgaga
cgcagttattattcttacctaatggagaccaatcagaatgagaaagccgctgaggtgaag
gagaacgaaggagacttcaccggtgctgttaacctctaccttaaagcaggactacctgcc
aaagcagcttggttggccatgagcaaagatgagcttctgtcaagccaggacattatcagc
cgcatcactgctgcactcatcaaaggagagttttatgagagggctggagacctgtttgaa
aggacaagaaataatcagagagccctggagtgttaccgcaaaggaaatgcttttaagaaa
gcggtggatttggctcgggttgcctttcctgcagaagttgtgaagctggaggaagtgtgg
ggtgactacttagtgcagcagaaacaaatggatgctgccatcaaccattacatcgaagct
ggacgctccaccaaggcgatagaagcagctattgcagctcgtcagtggaagaaagcattg
cacattctagagctacaggaggacaggactgctgccaaatattacctgaagattgcccag
cactacgcctctctgcaggaatttgaggtagcagagcgtctgtttgtcaagggtgatcac
attaaagatgctatagatatgtacactcaggctggccgatgggagcaagctcataagctt
gctgtaaagtgtatgacacaagaagatgtgtctgtcctctacgtcagcagagcacaagag
ctagagaaagagggcaagtacaaagaagccgaaaggctttttacaacagtagatgaacca
gatctcgccatcactatgtacaagaagaacaagatgtatgatgacatgattcgtttagtt
gctgttcatcacaaagacctgctgcaggaaacacacattcacctggccaaggaactagag
gctgaatccaggtttcaggaagccgagtatcactaccttgagggtcaggactggaaagct
gctgtcaacatgtacagagtcaatgatatgtgggaggaagcttatcggatagcaaaaacc
cacggaggagccaatgcccacaagcaagtggcctacctgtgggcaaaaagcctcggagga
gaggcagcagttaaactcctcaacaagtttggccttctggaaactgccattgactttgca
gcagataactatacgtttgactttgcctttgagttggctcgactctccatgaagcagaag
attcctgatatccatctcaaaaatgccatgttccttgaggaccagggcaatttcaatgag
gctgaaattgagttcatcaaagctggaaaacccaaagaggctgtgctaatgcacgttcat
aacaaggactggagtaatgcccagagagttgcagaggctcatgatccggaaagtgtggca
gacattcttgtgagccaggccaagttctgctttgaccagaaggaatttcaaaaagctgag
gccttcttgctcagggcacaaaggccggagctggctattaaatactacaaagatgctggg
atgtggactgatgcaatgcggatctgcaaagactatttgcccagcaagctgagcgtcctt
caaaaggaatatgaaagcgagggcaactggggtgtggaagggatgattgagcaagctcaa
gagtgggaacagaccggagactattcaagagctgtggactgctatctgaaagtgaaggac
tcatctaacttggacttgctgttgaagtgttggatgaaggcagcggaattggccattaaa
tttttatcccatgacaaggctgtggacgtaagtcagattgtcggtccacgtctgattcag
ctccgaaagtacaacgaggctgctgagctctacctcaacctagacctcattaagaacgcc
atagacgcattcattgagggggaagaatggaacaaagccaaaagagtggccaaggagctg
gatccaagacttgaggagtatgtggacaaacgctacaaagagcacctgaaaaatcaaggc
aaagttgactctttggttggagtagatgtggttgctgcactggacatgtatgcagaaaga
ggacagtgggagaaatgtattgacacagcctccaaacagaattttaaggtgctgcacaag
tacatcgccctgtacgccacccacctgatcaaagaaggtgaggtggagaaagtgctcagc
ctgtacatccagcatggagttccagcttattcacagaacttcaacatctacaagcggatg
ttccaggagctggtgaacctaagggaccgggattgtgcggaagcctttcggatgtggtca
gatctacgggacgtccttctgttgttgtgtgaaaacctgaccaagtcatcagaagctaat
tctccagcgcatgaggagtttgagcagatgttgctggttgctcactattacgccactcgt
tctgcagccaaaggcattgaccagctgagttctgtggcggccaagctgtccatctctctc
ctgaggcacaccgagctcattccagctgacaaggccttttatgaggctggcctggcagcc
aaggctgttggatgggagaacatggcttttatcttcctcaatcgcttcttggatttggct
gatggcattgatgagggaacactggatgctttagatcacacagacttccaggatacagac
atcccatttgaggtccctgttccttccaggctacacgtcacagtggagaagagggaggag
attagagaatgggttctgactgtgtccatggaccagcgggtggagcaggtgctgccgaag
gatgagaggggcacgtacgaagcctccctcgtggccgccagcactggcatccggtcccta
ccttgcgtcatcacaggttaccccgtcctccgtaataaaattgagttcaaaagaccaggc
atggcagccaataaagatgactggaataaattcttgatggctacaaagaccactcacagt
ccagaatgtcaagatgtgctgaaatttatcacgcagtggtgtggaggtctcccatcagct
ggatattcctttcactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (49)   

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