KEGG   Danio rerio (zebrafish): 436605
Entry
436605            CDS       T01004                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a
  KO
K08490  syntaxin 5
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    436605 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    436605 (stx5a)
Membrane trafficking [BR:dre04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    436605 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Syntaxin Apolipoprotein Use1 DUF16 HrpB7 SKA1 DUF5063 UPF0242 Vac_Fusion DUF6746 MCPsignal DUF1664
Other DBs
NCBI-GeneID: 436605
NCBI-ProteinID: NP_001002333
ZFIN: ZDB-GENE-040718-18
Ensembl: ENSDARG00000025033
UniProt: Q6DG84
Position
14:8594367..8614744
AA seq 302 aa
MTCRDRTLEFQSACKSLQGRQLQNGTHSKPANNALKQRSDFTLMAKRIGKDLSNTFAKLE
KLTILAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRSGQNGRHIQTHSN
TIVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREHFSQAPVSASPLLANNFNSSVLMQ
DESRSLGAEVAIDMDSRANPLQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHM
VKEQEETIQRIDANVDDTELNVEMAHGEILKYFQSVSSNRWLMIKIFLVLIVFFVIFVVF
LA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacgtgccgggaccgcacacttgagttccagtcggcttgtaagtccctgcaggggaga
cagttacagaatggaactcactctaaacctgccaataatgcccttaaacagcgcagtgac
ttcactctcatggccaagagaattgggaaagacttgagcaacacatttgctaagcttgaa
aagcttacaatcttggccaaaaggaagtctttgtttgatgataaagcagtggagattgag
gagctaacatacatcattaaacaggatatcaacagtctgaataagcagatagcacagctg
caagaccttgtgcgatcccgcagtgggcaaaatggccgccacatacagacacattccaac
acaattgtcgtctcattgcagtctaagctggcatcaatgtccaatgatttcaagtcagtt
ctggaagtgagaacagagaatctgaagcagcagcgcagcagaagagagcatttctctcag
gctcctgtctctgcctctcctctactcgccaataacttcaatagctcagttctgatgcag
gatgagtccaggagtctgggagcagaagtggccatcgacatggactcgagggcaaaccct
ctgcagctgcagctcatcgatgaacaggactcgtatatccagagccgagcggacaccatg
cagaacatcgagagcacaatcgtggagttgggctccatctttcagcagctggcacacatg
gtcaaagagcaggaggagacgattcaaaggatcgacgctaacgtggacgacacagagctg
aacgtggaaatggcccacggcgagatcctcaagtacttccagtccgtctcctccaaccgc
tggctcatgatcaagatattcctggtactcatcgtcttcttcgtcatcttcgtggtcttc
ctcgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (42)   

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