KEGG   Danio rerio (zebrafish): 445398
Entry
445398            CDS       T01004                                 
Symbol
snrnp70
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa
  KO
K11093  U1 small nuclear ribonucleoprotein 70kDa
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    445398 (snrnp70)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    445398 (snrnp70)
Spliceosome [BR:dre03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    445398 (snrnp70)
 Complex B
    445398 (snrnp70)
SSDB
Motif
Pfam: U1snRNP70_N RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 445398
NCBI-ProteinID: NP_001003875
ZFIN: ZDB-GENE-040825-2
Ensembl: ENSDARG00000077126
UniProt: Q6DRE8
Position
3:31925057..31933771
AA seq 495 aa
MTQFLPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRDAPPPTRA
ETREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLR
REFEVYGPIKRIYIVYNKKTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVER
GRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRDDTSRYDDRPIGSDRDRDRGERRERSR
ERDRDKERGERRRSRSRERRRHTRSHERERAAAGDEAGGSSRRRERERERGGAGAGESRE
RSRDRDRDRDRKRRSRSRDRKRDRERGKGAEGGEEGMGGLVDGMMPEGGDRGIEDPLGGE
PGRGEEGGPEGEERGRDRDKDRERDRDRKRSHRDKDRERDRDRRRDRDRDRDHKRDRGDR
DRGERREDRHITSSGDHEGLGNGGEEGEEPVPPQSEEGSQDGMRMMMMDQDSMQSGEGYA
SNENGYRMEAQGDEY
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgactcagtttcttccgccgaacctgttggcattgtttgccccgcgggaccccataccg
ttcctgcctcaactgggaaagcttcctcacgagaaacaccacaaccagccctactgcgga
attgctccttttatccggcattttgaggaccccagagatgcccctccacccacaagagca
gagacacgggaggagagactggagaggaagagaagagaaaaaatggagaggaggcaagtt
gtggttgaaggagagctgaaattatgggacccacataatgacgctaatgcccaaggagat
gcgtttaagaccctgtttgtggctcgaattaattatgataccacagaatccaaactgcgg
cgagagtttgaggtctatggtcctatcaaacggatctacattgtgtacaacaagaaaact
ggaaaaccaagaggctatgcgttcattgaatacgagcacgagagagacatgcactctgct
tataagcatgcggatggcaaaaagatcgatggtcgtagagtgcttgttgatgttgaaaga
ggacgaacggtaaaaggatggcgcccccggcgacttggtgggggtcttggtggcacaagg
cgaggaggcgcagatgtcaacatcaagcactctggcagagacgacacatctcgttatgat
gaccgaccaattggaagtgatcgcgatcgggatcgtggtgaacgccgtgaacgcagtcgg
gaacgtgatcgagacaaggaacgtggagaacgcagacgttctcggtccagagagagacgc
aggcacactaggtctcatgagcgtgagagggccgctgcaggggatgaggctgggggcagc
agccgacgacgagagagggaaagagaacgaggtggtgctggagctggagaaagcagagag
aggagtagagaccgggatcgagatagagaccgcaagagaaggagcaggagcagggatagg
aagagagacagggaaagaggaaaaggtgcagaaggaggggaggaaggcatgggcgggcta
gttgatggcatgatgcctgaagggggagataggggcatagaggaccccttgggtggtgaa
ccagggcgaggtgaggagggaggacctgaaggagaggaaagggggagggatcgagacaaa
gacagggaaagagatcgtgataggaagcgcagccatcgagataaagatagagaaagggat
cgggacagaaggcgggacagggatagagatcgtgaccataagcgagaccgtggagatcgg
gaccgtggggagcgaagggaagatcgacacattacctcctccggagatcatgagggtttg
ggtaatggaggtgaagaaggtgaagagccagtgccaccgcaatcagaagaaggttcacag
gatgggatgaggatgatgatgatggatcaggattccatgcagtcgggagagggctatgcc
tccaatgaaaatgggtacaggatggaggcccagggtgatgagtactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (69)   
   KEGG ORTHOLOGY (1)   
   RefGene (63)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (90)   

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