KEGG   Danio rerio (zebrafish): 445404
Entry
445404            CDS       T01004                                 
Symbol
snrpf
Name
(RefSeq) small nuclear ribonucleoprotein F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    445404 (snrpf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    445404 (snrpf)
   03041 Spliceosome [BR:dre03041]
    445404 (snrpf)
   03032 DNA replication proteins [BR:dre03032]
    445404 (snrpf)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     445404 (snrpf)
Spliceosome [BR:dre03041]
 Complex A
  U1 snRNP components
   Sm proteins
    445404 (snrpf)
  U2 snRNP components
    445404 (snrpf)
 Complex B
  U1 snRNP components
    445404 (snrpf)
  U4/U6.U5 tri-snRNP components
    445404 (snrpf)
 Complex C
  U2 snRNP components
    445404 (snrpf)
DNA replication proteins [BR:dre03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     445404 (snrpf)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 445404
NCBI-ProteinID: NP_001003881
ZFIN: ZDB-GENE-040930-9
Ensembl: ENSDARG00000105037
UniProt: Q6DRC1
Position
7:19374683..19378024
AA seq 86 aa
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYVDGALAGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagtttgccgctgaacccaaagccctttctgaatggtctgacaggaaagcctgtgatg
gtgaagctgaagtggggcatggagtacaagggctacctggtgtcagtggatgggtacatg
aacatgcagttggccaacacagaagagtatgtggatggagcgttagctggtcatcttggt
gaggtgctcatcaggtgtaataatgttttgtacattagaggagtagaagaagaggaagaa
gatggagagatgagagaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (2)   
   Pfam (2)   
All databases (52)   

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